Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1432 ATGGAGGGAGAGGGTGCTTCAGATGGAGAGAATAATCTGAAAAGGGGTGGCGTAGATGATAACAGTAATGAGAATAACAATGGAAGCAATAGCAAAGTTGCGAATTCCAATGAAGGGCAGAGCAAGCCCAAGCGCCAGATGAAGACCCCCTTTCAGCTAGAAACCCTCGAGAAAGCTTATGCCTTGGAGACTTACCCTAATGAGGCTATGAGGGCTGAGCTGTCTGAGAAATTGGGGCTGTCGGATCGGCAGCTGCAGATGTGGTTCTGCCACCGGAGGCTGAAGGACAAGAAGGACTTGCCGCCGAAGAAGCCGCCGAAGAAGGCAGCGGAGCCGTTGCCCATGCCAGATTCCCCAGTGGATGACCACAGGTTGGGTCCTGAGGTTGGTAATAATAATGGATCCGGGTCGGGTTCCGGGTCAAGCCCGTTTACCCGGTCGGAGTCCCGGAGCATAGCGGCGTCACGGGGCATGGCGGGCTATTATGAGTCGCCGCAGGCTGTGCTGGAGCTCAGGGCAATTGCTTGTGTGGAGGCACAGTTAGGGGGGCCATTGAGGGAGGATGGACCCATTCTTGGAATAGAGTTTGATCCATTGCCACCAGATGCGTTTGGGGCACCCTTAGCTATTGCAGAACAGCAGAAGCGGCCAAGTCTTGCCTATGACAGTAAAATTTATGAAAGACATGAAAGACGTGATGTTAGGAAAAATAAGGCTATGACAAGGGCTTTCCATGAATATCAATTTCTTCCGAACCAGTCTGGTATCAGGTCTGATGCTTTTGGACAATTTACCCAGCATCATTTACCTGATCCAATGGAAGGTCCTGCAAGAAATCCCCCTTTTGCACTTGGAAATGAACAGCCACCTAGAATTCATGCTACTCAAGGTCATTCTTCGCGAGTCCGTATTTTGTCTCAACAAGACAAGCAAGTGATTCCTTATCCATCTCCTCCTCGAGATGATGGTGTTGCTTCCCAAAAGGAGTTGTACACAAATGCAGCTAATGTTGGAATGAACTCTCACTTTACTGATCACCGAATTGTTGGACCAGAAAATCCCTGTGCCCTTCCAGGTGGACAAGTTTCCCATAACAATGCAATGCGGATCGAGAGGAAACGAAAGAACGATGATGCTAGAATTGCAAGGGAAGTTGAAGCACAGGAGATGAGGATTAAGAAAGAGCTTGAGAAACAAGATAACATTAGACGAAAGAATGAAGAACGAATGAGGAAAGAAATGGAGAGACAAGATCGTGAAAGAAGGAAAGAAGAAGAGAGGCTGGTGCGTGAGAGACAACGTGAAGAGGAAAGAATAAGGCGGGAGCAACAACGTGAAATTGAACGAAGAGAAAAGATTCTGCTGAAAGAAAATTTGAGAGCTGAGAAAATGAGGCAAAAAGAAGAGCTTCGCAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCCCTGGAGAAAGCTACTGCCCGTAGAATAGCTAAGGAATCTATGGAACTTATTGAGGATGAACAGCTGGAATTGATGGAGCTGGCTGCCTCAAGCAAGGGATTGTCCTCTATTATCCATCTTGATTTTGATACTCTGCAAAACCTTGAATCATTTAGGGATTTGTTGTGTGTTTTCCCACCTAAGAGTGTAAAGCTAAGAAAACCATTTGCTGTCCAACCCTGGATCAACTCAGAAGAGAATGTTGGAAACCTTCTCATGGTTTGGAGATTCTTGATTACTTTTGCTGATGTTCTTGAGTTGTGGCCCTTTACTCTGGACGAGTTTGTACAAGCATTTCATGATTATGATTCAAGACTGTTGGGTGAGATACATGTTGCGCTTCTTAAGGTGATAATAAAAGACATTGAAGATGTTGCAAGGACACCTTCTACAGGATTAGGCATGAATCAAAATGGTGCTGCTAATTCTGGAGGTGGCCATCCAGAGATTGTGGAAGGGGCATATTCATGGGGCTTTGACATACGAAATTGGCATAAGCACTTAAATCAGTTGACATGGCCAGAAATTTTTCGACAGCTAGCACTATCTGCAGGTTTTGGACCACAGTTGAAGAAAAGAAGTATTACATGGTCATATGCAAACGATAAAAATGAGGGCAGAAGTTGTGAAGATATCATTGATATCGTTTCCACACTTCGAAATGGTTCAGCAGCCAAAAATGCTCTGACAAAAATGCAGGAGAGAGGTCTATTAGCACCTCGAAAATCTAGACACCGCTTAACGCCTGGAACAGTAAAGTTTGCAGCATTTCATGTTCTCTCACTTGAAGGTAGCGAGGGATTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGCCTTCGGGACCTGACAACCAGCAAGACACCTGAGGCATCAATTTCTGTTGCTTTGACAAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCATCAACATATCGCGTACGTGCTGCATTTAGAAAGGATCCTGCTGATGCTGAGTCTATTCTTTCGGAAGCAAGAAAGAAAATTCAGATATTTGAAAATGGGTTTCTAGCTGGTGAAGAGGCTGACGATGTTGAAAGAGAAGAAGGGTCGGAAAGTGATGAAGGTGATGATGATCCTGAAGTTGATGATTTAGTAGATCCTTCAAGTGCTAACAAAACATCTGAAAGGTGTGATGACTTCCCATCGACTGGAATAGAAAATTTGGGTCACGATGTAGAACTTATTCAAGATGAGTTTGATAAGAATCTTCCTGAGAATGGTTCTAAGGATGAGAATGGTTCTGAGGATGCTGTTTGTCCAGATGCTGTTGCTGAACAACCTGTTGCTTGTGAAGATCTGAATGCTGGAAATCTTGAGGAAGATGATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCGTGGGTTGAAGGGCTTGCAGAAGGAGAATATTCTGATCTCAGTGTAGAGGAACGTCTAAATGCTCTTGTTGTATTGGTTGGTGTCGCAAATGAAGGAAATTCAATCCGTATTGTTCTTGAGGATCGTTTGGAAGCAGCAAATGCCCTGAAGAAGCAAATGTGGGCAGAAGCTCAGATAGATAAAGTTCGAATGAAAGATGATAATATTAATAAATCAGATTTTCTATTCATCAGTGGGAATAAAGTTGAAACACAATACACATGTCCTGCTGTGGGGGGAAACCAAAGCCCATTGCTTGACATTAATGTTGACAATAAATACAATGAGGCATCACCAAGCACTGCAGAAAATCAAAAAGCTGCTGTTGCACAGAACCTTTCTGTGGAAAAACCCTCATCAGTTCAAGATATCTGCACCGGCCCAGATAACCCTCTGACTCAGCTATCTGCACAATATTCAAAAAGGTCTCGGTCTCAGTTGAAATCTTATATTTCTCACATAGCAGAGGAGATGTATGTCTACAGATCCTTACCTCTTGGCCAAGATCGTAGACGTAATCGATATTGGCAGTTTGTTGCATCTACTTCTTGCAATGATCCTGGCTCTGGCAGGATCTTTGTTGAATATCATGATGGCAATTGGAGGCTTATTGATTCTGAAGAGGCATCTGTTCCGTCTGAAGCATTTCGATCGACTTGGACAGATGATACTAGAAGGCATTGGGGTGTGAAGCTGAGCAAATCAACTTCTGTCGACGAACTTTTACAGAGATTGACCTTATTTGAGAGAGCATTAGTGCGTGACTTTTTATCATCATCCTTCTTAACAACAGAAGAATTGTTGGGATCAAGCAGAATGTCAGAGAGTGCTGCACATACTTCTACTGATCCTGAATCTGTTGCTGTACTTCCATGGGTTCCACAGACCACCTCAGCTGTGTCTCTCAGACTTTTTGAATTTGATGCAGCCATTAGTTACGTTCAGCTTGAAAAACCTGAACATCACAGGGAGAAAGAAGCTAAAGAATACATAAAGCTTCCTTCAAGATCTAATCCCTTCAAATCTAGTAGAGGGGTTGAACCAGCAGACTTGAACCATGATGAATTCATGAAAGTTAAATCTGCACCTGTGAAAATAGTTAGAAGTGGCAATAAACGTGGAAGAGGGACTAATGATAAAGGACGAGCTAAAAAGATATCAAAGAGAATGTCTGATTCCAAACAGGATACTGGCCGCCGCAATGTTAGGGTGTCTGGAAATCTTGGTCAAAGATTAAAACAGCAGGGACGAGGAATACAAGGACAAAGTGGAGGAACACAAGGACAAGGTGGGGGACGTGGTCGGCGAACAGTCAGGAAAAGGAGAGTGGAAAAGAGGGCTGTTGAAGATTTGTTGCTGGGCCATAGGGCTGGCACACACAAGTCCAATATTGATAGAGAACCATTGAGAAGCATGGATGAGGAATGGGATGATGAAAAGGCAAGTCCCATGACTCCCATCCACGTGGGGGCTGCTGACACTAGTAACAGTGTTGAAGATGTGGAGTCTGATGACAATGCCCAGGCAGTGGAGTCTGATGACAATGCCCAGGCAGTGGAATCTGATGACAATGGCCAAGCGGTGGAATATGATCAAGGAAACTGGGAGATAGGTTTTAATGATACCCCCAACAGATGGATGGAGTTATTATTGAACTAG 4572 0.4399 MEGEGASDGENNLKRGGVDDNSNENNNGSNSKVANSNEGQSKPKRQMKTPFQLETLEKAYALETYPNEAMRAELSEKLGLSDRQLQMWFCHRRLKDKKDLPPKKPPKKAAEPLPMPDSPVDDHRLGPEVGNNNGSGSGSGSSPFTRSESRSIAASRGMAGYYESPQAVLELRAIACVEAQLGGPLREDGPILGIEFDPLPPDAFGAPLAIAEQQKRPSLAYDSKIYERHERRDVRKNKAMTRAFHEYQFLPNQSGIRSDAFGQFTQHHLPDPMEGPARNPPFALGNEQPPRIHATQGHSSRVRILSQQDKQVIPYPSPPRDDGVASQKELYTNAANVGMNSHFTDHRIVGPENPCALPGGQVSHNNAMRIERKRKNDDARIAREVEAQEMRIKKELEKQDNIRRKNEERMRKEMERQDRERRKEEERLVRERQREEERIRREQQREIERREKILLKENLRAEKMRQKEELRKEKEAERRKAALEKATARRIAKESMELIEDEQLELMELAASSKGLSSIIHLDFDTLQNLESFRDLLCVFPPKSVKLRKPFAVQPWINSEENVGNLLMVWRFLITFADVLELWPFTLDEFVQAFHDYDSRLLGEIHVALLKVIIKDIEDVARTPSTGLGMNQNGAANSGGGHPEIVEGAYSWGFDIRNWHKHLNQLTWPEIFRQLALSAGFGPQLKKRSITWSYANDKNEGRSCEDIIDIVSTLRNGSAAKNALTKMQERGLLAPRKSRHRLTPGTVKFAAFHVLSLEGSEGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAFRKDPADAESILSEARKKIQIFENGFLAGEEADDVEREEGSESDEGDDDPEVDDLVDPSSANKTSERCDDFPSTGIENLGHDVELIQDEFDKNLPENGSKDENGSEDAVCPDAVAEQPVACEDLNAGNLEEDDMEIDESKSGESWVEGLAEGEYSDLSVEERLNALVVLVGVANEGNSIRIVLEDRLEAANALKKQMWAEAQIDKVRMKDDNINKSDFLFISGNKVETQYTCPAVGGNQSPLLDINVDNKYNEASPSTAENQKAAVAQNLSVEKPSSVQDICTGPDNPLTQLSAQYSKRSRSQLKSYISHIAEEMYVYRSLPLGQDRRRNRYWQFVASTSCNDPGSGRIFVEYHDGNWRLIDSEEASVPSEAFRSTWTDDTRRHWGVKLSKSTSVDELLQRLTLFERALVRDFLSSSFLTTEELLGSSRMSESAAHTSTDPESVAVLPWVPQTTSAVSLRLFEFDAAISYVQLEKPEHHREKEAKEYIKLPSRSNPFKSSRGVEPADLNHDEFMKVKSAPVKIVRSGNKRGRGTNDKGRAKKISKRMSDSKQDTGRRNVRVSGNLGQRLKQQGRGIQGQSGGTQGQGGGRGRRTVRKRRVEKRAVEDLLLGHRAGTHKSNIDREPLRSMDEEWDDEKASPMTPIHVGAADTSNSVEDVESDDNAQAVESDDNAQAVESDDNGQAVEYDQGNWEIGFNDTPNRWMELLLN* 1524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1432 1523 Pfam DDT domain 561 616 IPR018501 -
Dod04g1432 1523 Pfam Homeodomain 42 98 IPR001356 GO:0003677
Dod04g1432 1523 CDD homeodomain 44 93 IPR001356 GO:0003677
Dod04g1432 1523 MobiDBLite consensus disorder prediction 1 52 - -
Dod04g1432 1523 Coils Coil 453 487 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 274 298 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 130 150 - -
Dod04g1432 1523 Pfam HB1, ASXL, restriction endonuclease HTH domain 745 813 IPR007759 GO:0006355
Dod04g1432 1523 Gene3D - 25 100 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 18 48 - -
Dod04g1432 1523 ProSiteProfiles HARE-type HTH domain profile. 745 814 IPR007759 GO:0006355
Dod04g1432 1523 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1133 1216 IPR028941 -
Dod04g1432 1523 Coils Coil 385 445 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 403 441 - -
Dod04g1432 1523 ProSiteProfiles DDT domain profile. 560 619 IPR018501 -
Dod04g1432 1523 ProSiteProfiles 'Homeobox' domain profile. 39 99 IPR001356 GO:0003677
Dod04g1432 1523 MobiDBLite consensus disorder prediction 842 891 - -
Dod04g1432 1523 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1179 1519 IPR044977 GO:0006357
Dod04g1432 1523 SMART testlast3 560 619 IPR018501 -
Dod04g1432 1523 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 955 998 IPR028942 -
Dod04g1432 1523 SMART HOX_1 41 103 IPR001356 GO:0003677
Dod04g1432 1523 MobiDBLite consensus disorder prediction 1340 1501 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 846 869 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 1371 1401 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 96 150 - -
Dod04g1432 1523 SUPERFAMILY Homeodomain-like 28 98 IPR009057 -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 1414 1453 - -
Dod04g1432 1523 MobiDBLite consensus disorder prediction 1343 1370 - -
Dod04g1432 1523 PANTHER HOMEOBOX DOMAIN PROTEIN 1179 1519 - -
Dod04g1432 1523 PANTHER HOMEOBOX DOMAIN PROTEIN 14 1180 - -
Dod04g1432 1523 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 14 1180 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1432 Dod-Chr4 35890997 35901229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1432 1179 1515 Homeobox Transcription Factor Family AT1G28420 36.314 1.03e-33 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dod04g1432 WSD 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1432 - - ahf:112733536 1741.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1432 04 35890997 35901229 Dod04g1432 04 35890997 35901229 ECH
Dod03g0461 03 5619947 5632057 Dod04g1432 04 35890997 35901229 ECH
Dod04g1432 04 35890997 35901229 Dod03g0461 03 5619947 5632057 PCT