Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1428 ATGTGGGGGCTCCCCCACGTGTACCTTCTGGAACTCGCGGAGAACTCGTTTTCCGGTTCCGTGGCAAAGACTATTGCGGGTGCAGGGAACCTGTCGCTGCTGTTTCTTTCGAAGAACAAGTTCGAGGGAGCAATCCCCGCGGAGATTGGGTGGTTGGAGAGTCTCGTGGAGTTCACTGGGAGTGGCAACATGTTCAGTGGTCCGATTCCTGAGACTATTGTGAATCTCAGGCAGCTTGGGACCCTTGATCTTCACAACAACAAACTCTCTGGGGAGCTTCCTAAGGGGCTTCATTCTTTGAAGAAGCTCAGTGTTTTGAATTTGGCCAACAATGGGATTGGTGGGAAGATTCCTGATGAGATTGGCAGTTTATCCGTGCTCAATTCTCTAGACCTTTCTAACAACCAGCTTTCAATGGAAGTTCCTCGCGGCTTGCAGAATTTGAAGCTAAATTTGCTAAATTTGTCTTATAATCATCTCTCTGGGGAGCTTCCACCTCTCTTGGCGAAAGATATGTATGTCGATAGCTTTCTAGGGAATCCTGGTTTGTGTGGTGATTTGAAGAGTCTCTGTAATGGCAGAGGCCAAGAGAAGAGTGTGGGGTATGTTTGGTTGCTTAGAACTATCTTCATTGTTGCCACCTTGGTGTTCTTCGTCGGTGTCGTGTGGTTCTACTTCAAGTATAAGAACTTCAAGGACGCGAAAAGGGCTATTGATAAGTCTAGGTGGACATTGATGTCGTTTCATAAACTGGGTTTTGGTGAAGATGAGATTTTGAATTGCCTTGATGAGGATAATGTGATTGGAAGTGGGTCATCCGGGAAAGTCTACAAGGTTGTGCTTAGTAGTGGGGAGGCTGTTGCGGTGAAGAAGATATGGGGAGGGGCTAGGAAGGGAGTGGAGAGTGGTGATGTGGAAAAGGGTGGTGGTGGACGGGTTCAAGACGATGCTTTTGATGCTGAGGTTGAGACACTGGGCAAGATTAGGCACAAGAACATTGTTAAGCTGTGGTGTTGCTGCACCACCAGGGATTGCAAGCTCTTGGTTTATGAGTACATGCCTAATGGTAGTCTTGGTGATTTGCTGCATAGCAGCAAAGGAGGGTTGTTGCTAGATTGGCCAACCAGATACAAGATAGCCGTTGATGCCGCTGAAGGCCTCTCTTATCTGCACCATGACTGTGTTCCTCCAATTGTTCACAGAGATGTGAAGTCCAACAATATCTTGTTGGATGGGGACTTCGGTGCAAGGGTAGCGGATTTTGGAGTGGCTAAGGTGGTCGAAACCGGAGGGAAAGGAACTAAATCCATGTCTATCATTGCTGGGTCCTGTGGCTATATTGCACCAGAATATGCATACACGCTTAGAGTGAATGAGAAAAGTGACATCTACAGTTTTGGTGTGGTCATACTTGAGTTGGTTACTGGGAGACGCCCGGTGGACCCTGAATTTGGAGAGAAAGATTTGGTGAAGTGGGTGTGCACGACCTTGGATCAGAAAGGGGTGGACCATATAATTGACTCTAGGCTTGATCCTTGTTTCAAAGACGAAATCTGCAAGGTCTTCAACATTGGCCTCATGTGCACAAGTCCGCTTCCGATCAACCGGCCCGCAATGAGAAGGGTGGTGAAGATGTTGCAAGAAGTTGGCGCTGAGAACCAAACGAAGCAGCCTGCCAAGAAAGATGGCAAGTTAACCCCTTATTACTTTGACGATGCCTCAGATCAGGGGAGTATTGCTTGA 1743 0.4768 MWGLPHVYLLELAENSFSGSVAKTIAGAGNLSLLFLSKNKFEGAIPAEIGWLESLVEFTGSGNMFSGPIPETIVNLRQLGTLDLHNNKLSGELPKGLHSLKKLSVLNLANNGIGGKIPDEIGSLSVLNSLDLSNNQLSMEVPRGLQNLKLNLLNLSYNHLSGELPPLLAKDMYVDSFLGNPGLCGDLKSLCNGRGQEKSVGYVWLLRTIFIVATLVFFVGVVWFYFKYKNFKDAKRAIDKSRWTLMSFHKLGFGEDEILNCLDEDNVIGSGSSGKVYKVVLSSGEAVAVKKIWGGARKGVESGDVEKGGGGRVQDDAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDLLHSSKGGLLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGDFGARVADFGVAKVVETGGKGTKSMSIIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRRPVDPEFGEKDLVKWVCTTLDQKGVDHIIDSRLDPCFKDEICKVFNIGLMCTSPLPINRPAMRRVVKMLQEVGAENQTKQPAKKDGKLTPYYFDDASDQGSIA* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1428 580 SUPERFAMILY L domain-like 3 169 - -
Dod04g1428 580 Gene3D Phosphorylase Kinase; domain 1 247 352 - -
Dod04g1428 580 Gene3D Ribonuclease Inhibitor 1 194 IPR032675 -
Dod04g1428 580 ProSitePatterns Protein kinases ATP-binding region signature. 268 291 IPR017441 GO:0005524
Dod04g1428 580 MobiDBLite consensus disorder prediction 553 580 - -
Dod04g1428 580 Gene3D Transferase(Phosphotransferase) domain 1 353 572 - -
Dod04g1428 580 SUPERFAMILY Protein kinase-like (PK-like) 258 546 IPR011009 -
Dod04g1428 580 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Dod04g1428 580 ProSiteProfiles Protein kinase domain profile. 262 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1428 580 SMART serkin_6 262 532 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1428 580 Pfam Protein kinase domain 264 485 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1428 580 Coils Coil 579 580 - -
Dod04g1428 580 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 1 561 - -
Dod04g1428 580 PANTHER LRR RECEPTOR-LIKE KINASE 1 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1428 Dod-Chr4 35824937 35829658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1428 1 580 Receptor kinase-like Gene Family AT1G28440 70.497 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Dod04g1428 Pkinase 2.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1428 - - gmx:100810256 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1428 04 35824937 35829658 Dod04g1428 04 35824937 35829658 ECH
Dod03g0466 03 5663643 5666544 Dod04g1428 04 35824937 35829658 ECH