Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1426 ATGACATGGTGCAATAACTCAGATGTGGAGAGGGGCATAGGACTAATCACCCCTAATATCATTCCTGTTCCTAGAACTAATGACACTTTTGTTACTCACACAAAACCACCCGAAATTCGAACTGTTATTTGCCCCTCATGTGGCCATAACATCGAATTCCAAGATCAGGCTGGAATTCATGATTTGCCGGGATTGCCAGCTGGGGTGAAGTTTGACCCGAATGACCTAGAGATACTTGAACATTTGGATGCAAAAGTTCAGTCTGATGTGCGCAAATTGCATCCCCTTATTGATGAGTTCATACCAACTCTTGAAGGCGAGAATGGGATCTGTTATACGCACCCAGAAAAACTACCAGGAGTAAGCAAAGACGGACAGGTTCGCCACTTCTTTCACAGGCCTTCTAAAGCATACACAACTGGAACAAGGAAAAGAAGAAAGGTTCACACTGACGAAGAAGGAAGTGAGACAAGATGGCACAAAACAGGCAAAACTAGACCAATTTCTGCTGGTGGAGCAGTGAAGGGTTTCAAAAAGATACTGGTCCTCTACACCAACTATGGCAGGCAAAAGAAGCCTGAGAAGACTAACTGGGTGATGCACCAATACCATCTTGGCAGCAACGAAGAAGAGAAAGATGGGGAATTAGTGGCCTCAAAGGTGTTCTACCAAACACAGCCTCGACAATGTGGGAATTCCATCATAAAGGATCCATATGAAGAAAGACTCATGACTCACCACCGAAGTGTCAACAATGACATTGCATTACCAAAAAATGCAGCTCTTAATGTGGATTACTACAATCCTCCTTTCATAACTTATGATCATATGATTCATAATAGGGAAAGCTCACCACAACTTATTCCAAACATGGTTGTGCAAGGTGATAGCTCTTCTTTTATTCGATTAGCAATGGATGCAAACAAAGCAAGGCTGGACAGAAAATAG 948 0.4283 MTWCNNSDVERGIGLITPNIIPVPRTNDTFVTHTKPPEIRTVICPSCGHNIEFQDQAGIHDLPGLPAGVKFDPNDLEILEHLDAKVQSDVRKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQVRHFFHRPSKAYTTGTRKRRKVHTDEEGSETRWHKTGKTRPISAGGAVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVASKVFYQTQPRQCGNSIIKDPYEERLMTHHRSVNNDIALPKNAALNVDYYNPPFITYDHMIHNRESSPQLIPNMVVQGDSSSFIRLAMDANKARLDRK* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1426 315 ProSiteProfiles NAC domain profile. 65 224 IPR003441 GO:0003677|GO:0006355
Dod04g1426 315 MobiDBLite consensus disorder prediction 138 166 - -
Dod04g1426 315 PANTHER NAC DOMAIN-CONTAINING PROTEIN 10 1 299 - -
Dod04g1426 315 SUPERFAMILY NAC domain 59 224 IPR036093 GO:0003677|GO:0006355
Dod04g1426 315 Pfam No apical meristem (NAM) protein 66 205 IPR003441 GO:0003677|GO:0006355
Dod04g1426 315 MobiDBLite consensus disorder prediction 144 163 - -
Dod04g1426 315 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 299 IPR044799 GO:0003700
Dod04g1426 315 Gene3D NAC domain 75 228 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1426 Dod-Chr4 35731691 35735692 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1426 1 234 NAC Transcription Factor Family AT4G28500 72.881 1.27e-123 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g1426 NAM 2.4e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1426 - - gmx:100795920 506.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1426 04 35731691 35735692 Dod04g1426 04 35731691 35735692 ECH
Dod03g0469 03 5686006 5689467 Dod04g1426 04 35731691 35735692 ECH