Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1416 ATGGATTTCAGTACTAGCAACGGCAGTGAAGAAAGTGAACTGTACCATGCTCAAATCCATTTGTACAAGCATGTGTACAACTGGGTCAGCTCTAATGCTCTCAAGTCTGCTATGGAGCTAGGCATAGCAGACATAATCCACAACCATGGAAAACCCATCACTCTCTCCGAATTAGCCTCAGCTCTGAAACTCCACCCTTCAAAAGTAGGGAGCCTCCACCGTTTCCTTCGCCTCCTAACACACAACGGTTTCTTTGCCAAAACAAAAGTAACCTTGCAGAACGGAAAAGAAGAAGAAGAAGCATATGTTCTTACTCCACCATCAAAGCTCCTCATCAGAAGCAAGCCAACGTGTCTAGCACCCATAGTCCGGGGTGCACTCCATTCAAGCTCTCTGGACATGTGGCACTCATCCAAGAAGTGGTTCACTGAGGACAAGGAACAAACCATGTTTGAGAGCGCGACAGGGGAGAGCTTCTGGGACTTCCTTAACAAGCAAACAGATTCGCTGAGCATGTTCCAAGATGCCATGGCCGCTGATTCTTACATGTTCAAGCTTGCTCTCAAGGAGTGCAGCCACGTGTTTGAGGGTTTGGGCTCCCTTGTCGATGTGGGAGGTGGCACTGGCGGTGTCACAAAGCTCATCCATGAAGCTTTCCCTCACTTGAAGTGCACGGTGTTTGACCAACCACAGGTTGTGGCTAACGAGAAAGGAAGCGACAATTTGAACTTTGTTGGTGGTGATATGTTCAAGTCCATCCCTTCTGCCGATGCAGTTTTACTCAAGTGGGTTCTACATGACTGGAATGATGAACTTTCAGTGAAGATACTGAAGAACTGCAAAGAAGCTATTTCGGGAAGAGGGAAAGAAGGGAAGGTGATTATCATAGACATAGCTATTGATGAAGAGAGTGATGATCCCGGGTTGACTGAGTTGAAACTGGACTACGACTTGGTTATGCTGACTATGTTCAATGGGAAGGAAAGGGAGAAGAAAGAATGGGAGAAACTCATCTACGAGGCAGGCTTCAGCAGATACACGCTTACCCCGATTTGTGGCTTCAAGTCTCTCATTGAAGTTTATCCTTAA 1089 0.4674 MDFSTSNGSEESELYHAQIHLYKHVYNWVSSNALKSAMELGIADIIHNHGKPITLSELASALKLHPSKVGSLHRFLRLLTHNGFFAKTKVTLQNGKEEEEAYVLTPPSKLLIRSKPTCLAPIVRGALHSSSLDMWHSSKKWFTEDKEQTMFESATGESFWDFLNKQTDSLSMFQDAMAADSYMFKLALKECSHVFEGLGSLVDVGGGTGGVTKLIHEAFPHLKCTVFDQPQVVANEKGSDNLNFVGGDMFKSIPSADAVLLKWVLHDWNDELSVKILKNCKEAISGRGKEGKVIIIDIAIDEESDDPGLTELKLDYDLVMLTMFNGKEREKKEWEKLIYEAGFSRYTLTPICGFKSLIEVYP* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1416 362 PANTHER O-METHYLTRANSFERASE 6 362 IPR016461 GO:0008168
Dod04g1416 362 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Dod04g1416 362 Gene3D Vaccinia Virus protein VP39 113 362 IPR029063 -
Dod04g1416 362 PIRSF O-mtase 1 362 IPR016461 GO:0008168
Dod04g1416 362 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 362 IPR016461 GO:0008168
Dod04g1416 362 Gene3D - 3 111 IPR036388 -
Dod04g1416 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 117 361 IPR029063 -
Dod04g1416 362 Pfam Dimerisation domain 33 80 IPR012967 GO:0046983
Dod04g1416 362 Pfam O-methyltransferase domain 135 344 IPR001077 GO:0008171
Dod04g1416 362 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 6 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1416 Dod-Chr4 35589133 35591518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1416 33 343 Monolignol Biosynthesis Gene Families AT5G54160 34.076 3.57e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1416 K22588 - gmx:106795493 580.096