Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1400 ATGAAATCAAGCTTCCATTGGAGGAATGAACAACCTCCCCTGAACGAGTCTGTTGAAATTGAAGAAGCCTTAACTTTTTTGAACAAGGTTAAGACTCGGTTTCAAGGAGGCGGTGGTGTTTACAATTCGTTTATAGACATATTGAGAACGTACAGAAGTGGAAAAAAGTCTATCGCCGAGGTGTATTGGAAGGTTGCTGTACTTTTCCAGGACCACATAGATCTTCTTCATGAGTTTAATAAGCTCCTTCCCACAACTGTAAAAGATCCAGTCATGCAACTCTCTGAACTAATGGCAAAGAAATGA 306 0.402 MKSSFHWRNEQPPLNESVEIEEALTFLNKVKTRFQGGGGVYNSFIDILRTYRSGKKSIAEVYWKVAVLFQDHIDLLHEFNKLLPTTVKDPVMQLSELMAKK* 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1400 101 Pfam Paired amphipathic helix repeat 40 81 IPR003822 GO:0006355
Dod04g1400 101 PANTHER SIN3A, ISOFORM G 16 86 - -
Dod04g1400 101 SUPERFAMILY PAH2 domain 12 84 IPR036600 GO:0006355
Dod04g1400 101 Gene3D Paired amphipathic helix 14 87 IPR036600 GO:0006355
Dod04g1400 101 PANTHER SIN3B-RELATED 16 86 IPR039774 GO:0003714
Dod04g1400 101 ProSiteProfiles PAH domain profile. 16 86 IPR003822 GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dod04g1400 PAH 6.7e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1400 K11644 - qsu:112008577 98.2117