Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1398 ATGGCTTCCTCCAACAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTAGCAACCCCAACCACCAATTTCAGCATGACATCAACCCCTCTCTAATGTCAACTGGTTGCCACAGAAGCCCATATATTTCAGGATGTGATGAGAAAAGTCCAGAACCAAAACCAAGATGGAACCCAAAACCAGAGCAAATTCGCATACTTGAGGCCATCTTCAATTCTGGGATGGTGAACCCTCCAAGGGAAGATATAAGGAAGATCCGGATACAGTTGCAAGAGTATGGTCAAGTCGGGGATGCCAATGTCTTCTACTGGTTCCAGAACCGGAAATCAAGGAGCAAGCACAAACTCCGCCACCTCAACAACACTAAGAACCAGAACTCATCGTCGTCGTCATCATCATCACAGTCCCTACAAAACCCTGCTAATTCACTCCCTCAATTCACAGCAACCAATAATAATTCATCATCTTCCTCTTCCTCTGAGAAATCCTCCCCAAAAGAAATGATTCCCCCCAACAACAAGGGATTCTCCATCGGCTTATCAAACGTCACCGAAGTGGTGCCTAATTCTCCCACCGCCTCTGTGAACCAGACTTATTTTCAGGCCCACAATCAGATCAATCTACTTCCTCCACCACCTGAACCTTTCTTCCCTTCGTACCATAATGGTCAAGGAGTAGTAGTAGTGGGTACTAACAATGGCATAACAACACAAGGTTATGGCTTCTCTGAGCTCTCCAATGTGATTCATCAAGGTCGTCAACCTCACACACATGGTCCTTCCACTAATCTGCTGCTTAGTGAGATCATGAGCCATGGAGCCTCCTCAAAGAGATACCAGGACCACCAGGACAAGGACATGAAGATAATGAACCAACAGCACTCACAATTCATCAGTTTCTGTCAAGCATCCACCCCAACTCCAAACGTTGTTGTTCCTTCCATCACTAACACAACCGTTACTGTTCCATCCCCCATCACTCAACTTCAAGGTGTTGGTGGTGGTGCTGGTACGGCGAAATCTACGGTGTTCATAAACGACGTCGCATTCGAGGTTGCTGTGGGGCCCTTCAACGTGCGAGAGGCCTTTGGGGACGAGGCGGTGCTCATCCAACCCTCTGGCCACCCTATCCTCACCGACGACTGGGGTATAACCCTACAACCACTTCAGCATGGTGCATCTTATTATCTGATTTAG 1194 0.4782 MASSNRHWPSMFKSKPSNPNHQFQHDINPSLMSTGCHRSPYISGCDEKSPEPKPRWNPKPEQIRILEAIFNSGMVNPPREDIRKIRIQLQEYGQVGDANVFYWFQNRKSRSKHKLRHLNNTKNQNSSSSSSSSQSLQNPANSLPQFTATNNNSSSSSSSEKSSPKEMIPPNNKGFSIGLSNVTEVVPNSPTASVNQTYFQAHNQINLLPPPPEPFFPSYHNGQGVVVVGTNNGITTQGYGFSELSNVIHQGRQPHTHGPSTNLLLSEIMSHGASSKRYQDHQDKDMKIMNQQHSQFISFCQASTPTPNVVVPSITNTTVTVPSPITQLQGVGGGAGTAKSTVFINDVAFEVAVGPFNVREAFGDEAVLIQPSGHPILTDDWGITLQPLQHGASYYLI* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1398 397 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 397 - -
Dod04g1398 397 SUPERFAMILY Homeodomain-like 47 116 IPR009057 -
Dod04g1398 397 Gene3D - 46 136 - -
Dod04g1398 397 MobiDBLite consensus disorder prediction 112 175 - -
Dod04g1398 397 Pfam Homeodomain 53 113 IPR001356 GO:0003677
Dod04g1398 397 MobiDBLite consensus disorder prediction 1 58 - -
Dod04g1398 397 MobiDBLite consensus disorder prediction 1 37 - -
Dod04g1398 397 MobiDBLite consensus disorder prediction 120 166 - -
Dod04g1398 397 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 397 IPR044557 GO:0003700|GO:0050793
Dod04g1398 397 SMART HOX_1 51 118 IPR001356 GO:0003677
Dod04g1398 397 CDD homeodomain 52 114 IPR001356 GO:0003677
Dod04g1398 397 ProSiteProfiles 'Homeobox' domain profile. 49 114 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1398 Dod-Chr4 35365686 35368851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1398 1 397 Wox Gene Family AT2G33880 43.590 5.43e-92 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod04g1398 Homeodomain 8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1398 - - cam:101490093 462.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1398 04 35365686 35368851 Dod04g1398 04 35365686 35368851 ECH