Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1393 ATGCTTCGCAGAACTTCATCATGCTTAGCCAAAGCAACCAACACTACCCGCACCCCTCGCCAGCTCTCAGTTGATTACTATGCAAAAACTTGCCCCCAGGTAGAGCAGCTCATAGGCTTAGTAACCTCTCAACAATTCAAAGAATCACCTGTTTCTGGGCCTGCCACCATTCGCCTCTTCTTCCATGATTGTTTTGTACAAGGCTGTGATGCATCAATTTTAATAGCATCAAAGCCTGGAAGCAAGGAATTGGCAGAGAAAGATGCAGAGGATAACAGAGAGTTGAAGATGGAAGGTTTTGAGACTGTGAGGAAGGCTAAGGAACTAGTAGAGAAAAAGTGCCCAGGTGTGGTATCATGTGCTGACATTCTTGCAATTGCAGCAAGAGATTATGTGCACCTGGCAGGTGGACCCTATTACCAAGTGAAGAAAGGAAGATGGGATGGGAAGATATCAATGGCATCAAAGGTGGGGCCCAACATCCCTCATGCAAACTCCACCGTTGATCAGCTCATCACACTCTTCAACTCAAAAGGCTTAACCATACAAGACATGGTTGCTCTCTCAGGTGCACACACAATCGGGTTCTCCCATTGCAAGCACTTTGTGACCCGGCTCTACAATTACATGGGCAAGGGTCAACCCGACCCGAACATGGACCCGAAGCTCCTTCATGCACTGAGAATGTATTGCCCAAACTATGGTGGAAACTCAGACATTGTTGCCCCATTTGATGCAACTACACCATTCCTATTTGACCATGCATATTATGCTAACTTGCAGAGCAAGATGGGTTTGCTATCCTCTGACCAGGCTTTGGTTCTCGACCCAAGAACCAAGCCGGTGGTTCAGGAGCTTGCAAAGGATAAGCACAAGTTTTTTCAAGCTTTTGCAGCTGCCATGGACAAATTGAGTTTGGTGAAAGTGGTAAGAGGGAGGAAGCATGGGGAGAAAAGAAGAGATTGCAGCATGCATGTGTGA 981 0.4679 MLRRTSSCLAKATNTTRTPRQLSVDYYAKTCPQVEQLIGLVTSQQFKESPVSGPATIRLFFHDCFVQGCDASILIASKPGSKELAEKDAEDNRELKMEGFETVRKAKELVEKKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGKISMASKVGPNIPHANSTVDQLITLFNSKGLTIQDMVALSGAHTIGFSHCKHFVTRLYNYMGKGQPDPNMDPKLLHALRMYCPNYGGNSDIVAPFDATTPFLFDHAYYANLQSKMGLLSSDQALVLDPRTKPVVQELAKDKHKFFQAFAAAMDKLSLVKVVRGRKHGEKRRDCSMHV* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1393 326 CDD secretory_peroxidase 21 323 IPR033905 GO:0004601|GO:0042744
Dod04g1393 326 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PANTHER PEROXIDASE 19 13 322 - -
Dod04g1393 326 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Dod04g1393 326 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
Dod04g1393 326 Gene3D Peroxidase, domain 2 162 304 - -
Dod04g1393 326 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 ProSiteProfiles Plant heme peroxidase family profile. 21 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 Gene3D - 25 324 - -
Dod04g1393 326 SUPERFAMILY Heme-dependent peroxidases 21 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dod04g1393 326 PANTHER PEROXIDASE 25-RELATED 13 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1393 Dod-Chr4 35296763 35300405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1393 17 326 Peroxidase AT2G34060 63.871 1.01e-155 438
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1393 K00430 - gmx:100777463 565.459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1393 04 35296763 35300405 Dod04g1393 04 35296763 35300405 ECH