Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1386 ATGATCCAAGAGGTAAAACCAATGAGGTCAAGTGGCACAGTAAAAGGTTTGTCTGGTCCCATAATTTGGCCTGGGGATTTATTGAGGGCTCCAAGAGGTTGGAAAATGTCTACAAGTGCAAAACCAATGAAAATCGGTGTTCCAGGGAGGACTCCATTCGAGAAGTTTGTGAAGGTTGAGTACAGCCAAGACTCAAATCAGACCAAGTATAGTGGATTCTGCATTGAAATTTTTGAAAAGGTTCTAGATCTATTGCAGTATGATCTACCATATGAATTTGTTCCCATTAATGGAACCTATACTGATCTGGTTTTTCTTGTCTATAACAAGACTCTTGATGCCGTTGTTGGTGACATAACCATCGTGACTGACAGAATGCAATACGTGGATTTTACAATGCCATATGCAGAGTCAGGATTATCTATGATAGTTCCTGCAAAATCTGAGGATACAGCTCTTATTTTCGTGAAGCCCTTCACCAGGGAAATGTGGATGGTCATAGTTTCCATCCTGATCTTCACCATGTCCACAGTTTGGTACTTGGAGAAGGGTTCCAATCCAGAATTTAGTGGTCCATGGAAAACTCAGATCAGCACTGCCCTATGGTTTACCATCTTTTCTCTATTTTTTGTCCACAGAGAGAAAATCTATAGCAACTTGACTCGAATGGTGATTGTTGTGTGGCTTTTCCTTGTTATGATCCTAACCTCGAGCTACACTGCTAATCTATCATCAATGCTGACAGTTCAACAATTGCAACCAACAGTTACAAATGCTGAGTCACTTATTAGGAGTAACTCCAAAATCGGCTTCTCAGGTGATCCATTTGTGAGAAAATATTTGGAAGATGTGCTTCTTTTCAAATCACAAAATATTATCAAATTAGGCAAGTACAACTACACTGAGGAGTTCAAATGCAAGCACATAGCAGCTGCCTTTATTGAAATCCCCTATGCAAAGGTATTCATCAGCAAGAACTGCCGGGGATACTCTGCCTTCACAACATTCAACAGATTTGGAGGGCTAGGCTTTGTGAGTAATAACAGAAACTTATTTTAG 1059 0.4013 MIQEVKPMRSSGTVKGLSGPIIWPGDLLRAPRGWKMSTSAKPMKIGVPGRTPFEKFVKVEYSQDSNQTKYSGFCIEIFEKVLDLLQYDLPYEFVPINGTYTDLVFLVYNKTLDAVVGDITIVTDRMQYVDFTMPYAESGLSMIVPAKSEDTALIFVKPFTREMWMVIVSILIFTMSTVWYLEKGSNPEFSGPWKTQISTALWFTIFSLFFVHREKIYSNLTRMVIVVWLFLVMILTSSYTANLSSMLTVQQLQPTVTNAESLIRSNSKIGFSGDPFVRKYLEDVLLFKSQNIIKLGKYNYTEEFKCKHIAAAFIEIPYAKVFISKNCRGYSAFTTFNRFGGLGFVSNNRNLF* 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1386 352 Gene3D - 152 272 - -
Dod04g1386 352 Pfam Bacterial extracellular solute-binding proteins, family 3 67 148 IPR001638 -
Dod04g1386 352 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 345 - -
Dod04g1386 352 SUPERFAMILY Periplasmic binding protein-like II 21 345 - -
Dod04g1386 352 SMART GluR_14 44 352 IPR001320 GO:0015276|GO:0016020
Dod04g1386 352 PANTHER GLUTAMATE RECEPTOR 14 345 - -
Dod04g1386 352 Gene3D - 29 151 - -
Dod04g1386 352 Pfam Ligand-gated ion channel 161 314 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1386 Dod-Chr4 35261754 35263477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1386 19 345 Ion Channels AT2G29120 40.303 7.01e-79 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1386 - - aprc:113859864 565.459