Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1384 ATGGCATCTGATCAAGATCATGATAATGCAGATGGTTACCAAGGTACCATAGGCCTTGTGATCACTCTCGCTGTTGTTCTCTCTTTAGGTGGTGTAGTCTTGATCATCGTCATCACCCATTTCTGTGCAAAACATCTAAGAAGCCAACAAAGAACACGCCGCCACAATAATGATCTTCTTTACCTTATTCAAATTGCACCTTCTAACATAAACTTTTCCGAATCACCCAATTCAGGCCTTGATCCTGAAATCATAGCCTCCTTGCCTAAAATCTTGTACAAGGAAACGGATCAGTTCAAGCAAGGTGAAGAAGTTGTGGAGTGCTCGGTTTGCTTAGGGACCATAGTGGAAGATGCAGCAGTTAGAGTGCTACCGAATTGTAAGCACGTGTTCCATGTTGATTGTGTTGACACGTGGTTAAGTTCAAACAGCACTTGCCCAGTTTGCCGCACAGTGGCTGAACCGAGGGTGCAGAATGATTTCCAACCCTCAGCACCATTGGTTGAGGAGGATGGTGATGGTGGCGTGTCATGGGATGTTAATCATGAATTGGAAGAAGTGGTAATGGGTTGTTCAGGCTTGAGAACGGCTTCTTTTCCTAGGATGGGTATTATTAGCAAGGAAAGATCATTGAGAAGGAATAAAAGCTATGATGGGTCTGCTGCTGTCATAGAAGATACAGAAAAGCAGTGA 693 0.4401 MASDQDHDNADGYQGTIGLVITLAVVLSLGGVVLIIVITHFCAKHLRSQQRTRRHNNDLLYLIQIAPSNINFSESPNSGLDPEIIASLPKILYKETDQFKQGEEVVECSVCLGTIVEDAAVRVLPNCKHVFHVDCVDTWLSSNSTCPVCRTVAEPRVQNDFQPSAPLVEEDGDGGVSWDVNHELEEVVMGCSGLRTASFPRMGIISKERSLRRNKSYDGSAAVIEDTEKQ* 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1384 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 155 IPR013083 -
Dod04g1384 230 SUPERFAMILY RING/U-box 88 156 - -
Dod04g1384 230 SMART ring_2 108 149 IPR001841 -
Dod04g1384 230 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Dod04g1384 230 PANTHER RING-H2 FINGER PROTEIN ATL40-LIKE 5 230 - -
Dod04g1384 230 Pfam Ring finger domain 107 150 IPR001841 -
Dod04g1384 230 PANTHER RING FINGER DOMAIN-CONTAINING 5 230 - -
Dod04g1384 230 CDD RING-H2_PA-TM-RING 107 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1384 Dod-Chr4 35231830 35232522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1384 21 218 C3H Transcription Factor Family AT2G42360 38.384 4.01e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1384 K19038 - gmx:100786701 226.483