Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1383 ATGGGTTCGGGCCATTGGTTTAAGACAATAATTCGATTAAGAAAATCAAAACAAAGCAGATCAAAGAAAGCAAAGGGATCTTTAGCTTCAGAGAAGTTAGGTTCATTGAAGGCGAAGAATTATGCAGGAAAAGAGTTGAGTGGTTTAGCAAATGGTACCGCAAGTGAAAATTCTGTGTCAGCCGGTGGGGTATCAGTTGAAACTATTGCTGCAACAAGGATACAGACGGTATTCCGGGCTTATAAGGCTAGAAAATCTTTACGCCGGTTGAAAGGACTTCACAAAACTAAAGATCCTTACAGAAGGTTACTCTGTTAA 318 0.3994 MGSGHWFKTIIRLRKSKQSRSKKAKGSLASEKLGSLKAKNYAGKELSGLANGTASENSVSAGGVSVETIAATRIQTVFRAYKARKSLRRLKGLHKTKDPYRRLLC* 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1383 105 ProSiteProfiles IQ motif profile. 67 96 IPR000048 GO:0005515
Dod04g1383 105 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 3 95 - -
Dod04g1383 105 PANTHER IQ-DOMAIN 5-RELATED 3 95 - -
Dod04g1383 105 Gene3D - 6 96 - -
Dod04g1383 105 Pfam IQ calmodulin-binding motif 70 88 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1383 1 97 IQD Protein Family AT2G33990 41.237 5.54e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1383 - - var:108341135 129.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1383 04 35224755 35226104 Dod04g1383 04 35224755 35226104 ECH
Dod03g0498 03 5966928 5968488 Dod04g1383 04 35224755 35226104 ECH