Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1374 ATGGATTTCCCCAAAAAGCGCAAGACAGAGGAGAACGGCGACGCCGATTCAACGTCGCCAACAGAACAACAACCACAACAGCAACAGCCATCACCCTCCTCCGCCGCCGCAACCACCACCATCCCCCTCACCCCAGAAGACATCCGCAAGATCCTGCAGCCCTTCACGCAGGACCAGCTCCTCGACCTCCTCCAGTCAGCCTGCCTCCACCACCCCGACGTCCTCGACGCCGTCCGCTCCGTCGCCGACCGCGACTCCACTGCCCGAAAGCTCTTCGTCCGCGGCCTAGCCCCCCAGACGACCACCGACACCCTCCGCTCCGTCTTCTCCGCCTTCGGCAACCTCGACGAGGCCATAGTCATCTTCGACAAGAACACCGGGAAATCCAAGGGCTACGGCTTCGTCACGTTCTCACACGTCGACGGCGCCCTCCTCGCCCTCAAGGACCCAAGCAAGAAGATCGACGGCCGCATGACCGTCACCCAGCTCGCTGCCGCCGGAGGCCCGGGCGCCGCTGCCGCCACCGACATCGCCGCACGGAAGGTTTATGTGGGTGGCGTCCCCTTCGAAATCTCGTCGGAGAAGCTCCTGAGCCACTTCCTGGCGTACGGCGAAAGTGGAAGAAGGGCCCCTAGGGTTTGA 642 0.6386 MDFPKKRKTEENGDADSTSPTEQQPQQQQPSPSSAAATTTIPLTPEDIRKILQPFTQDQLLDLLQSACLHHPDVLDAVRSVADRDSTARKLFVRGLAPQTTTDTLRSVFSAFGNLDEAIVIFDKNTGKSKGYGFVTFSHVDGALLALKDPSKKIDGRMTVTQLAAAGGPGAAAATDIAARKVYVGGVPFEISSEKLLSHFLAYGESGRRAPRV* 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1374 213 CDD RRM_RBM24_RBM38_like 89 163 - -
Dod04g1374 213 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 89 166 IPR000504 GO:0003723
Dod04g1374 213 PANTHER GEO13361P1-RELATED 1 205 - -
Dod04g1374 213 MobiDBLite consensus disorder prediction 1 15 - -
Dod04g1374 213 MobiDBLite consensus disorder prediction 16 38 - -
Dod04g1374 213 Gene3D - 3 175 IPR012677 -
Dod04g1374 213 SMART rrm1_1 90 162 IPR000504 GO:0003723
Dod04g1374 213 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1 205 - -
Dod04g1374 213 SUPERFAMILY RNA-binding domain, RBD 88 205 IPR035979 GO:0003676
Dod04g1374 213 MobiDBLite consensus disorder prediction 1 38 - -
Dod04g1374 213 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 91 157 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1374 Dod-Chr4 35033639 35034280 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1374 46 197 C2H2 Transcription Factor Family AT2G19380 34.868 9.37e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1374 K12741 - zju:107411269 258.455