Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1368 ATGTGCCACCACACTTTGAGCGTTCTCTTGTTTTCCTTTCTGTTATGTTGTTGTTCTTCTCCCTCCGCCGCCGCTCAGCGGCGGCTCCTCCACCAGCCACTCTTTCCTGCAGTCCCCATTCCGCCAATACAACCACCAACTCCGTCTCCAGAACCACAACCACAACATCAACAGCCGAAGCTTCCATTCTCTTCAACTTCATCACCTCCATCATCCCCTTCTGCACCAAAGAACTCCTTCTTCCCTTCCTACCGTTCTCCACCACCGCTCCCTCCATCACCACCCATGGTGGCCACATTTCCAGCCAACATCTCCTCCCTCCTCATCCCACACCCCTCCGCCCGCACCACCCACCGCCCCGCCCTCGCCCTCGCCCTCTCCCTCTCCCTCCTCTTCCTCGCCCTCCTCTCCGCCGCTGCCGCCTTCGCCCTCCACCGACGCCGCCGCTCCGCCACTTCCGCCGCAGCCGATGACGACGATGACAAGGGCTCTGGATCCGACACCCTCCGCCTGTACCCCCGGAACGCCGCCACCTCCGACGGCGTCGTCCACCACCACCAGAAGCCCCGCGGCGGCGCGTCAAGCCCGAGGCCCGAGTACCTTTACCTCGGCACGGTGGCGCGTTCGGAGCCGTCGGATTCGAGCTGCTGCAGCAGCACCAACGACGGCGATGTCAGGCCGCCGCCGTACCGGAAACTCGGAGACTCGCCGGAGCTGAAACCATTGCCTCCACTCCCGCGCCATAATTTCCGACCATGGCTGAGTGAAGAAGAGGACAATGAAGAGAAGAAGAATGAGAATGAAGAAGATGAAGAAGAGGAAGAGTTCTTTTCTCCGAGAGGGTCTTCTGGGAACAAACAACTTCAGAGAAGCTTCACTTCGAGAACCCCTTCTTACCCTCGTTCCAACTCTCTTTCTAATTCTCATTCCAGTTCCCCTTTGAGCCCCAGAAGCATCAGATCGTTGCCTCGTCAGAACCCTCTTTCTGCGTCGCATTCTCCCTCTTTCTCTTCGTTATCCTCTTCTCCGAAGGATTTTCCGGCGATCAAACTGGCTCCTCCTCCGCCACCGCCACCTCCGCCTCCACCGCCACGGTTTTGGGAGACACCGGTGGTGAATAGGAGCGAGAGTGAGGAGACTCCGAAGCCAAAGTTGAAAGCTTTGCATTGGGATAAAGTTAAGGCCAGTTCCGACAGGGCCATGGTTTGGGATCGGTTGAGACCAAGTTCTTTCCAATTGAACGAGGACATGATTGAGACGCTGTTTATGGTGAATAATGCGAAGGAAAATCCTGCACTTGCTCTTAGAGACAATGCTCGGCGTCAAATGGTTCATTCTTCTGCCGTGCCATTGGAAAATAGGGTGCTTGACCCTAAGAAGTCTCAGAACATTGCCATTTTGCTTAGGGCGCTCAATGTAACTATTGACGAAGTTTGTGAAGCCCTAAGGGAAGGCAATTGTGATACAATGGGAACTGAACTTCTAGAAAGTTTATTGAAGATGGCACCAACAAAAGATGAAGAATCTAATCTGAAGGAGTTCCGAGATGAATCTCCCTTCAAGCTTGGCCCAGCTGAGAAATTTCTTAAAGTCATGCTTGATATACCTTTTGCATTTAAGAGAGTGGATGCTATGCTCTACATTGCTAATTTTGATTCAGAATTAGAATACCTGGATAAGTCCTTTGAAACACTGGAGGTGGCTTGCGAGGAATTGAGGAATAGCAGAATGTTTCTGAAGTTGCTTGAGGCGGTGCTCAGAACTGGAAACCGGATGAATGTTGGCACTAATCGCGGTGATGCACATGCATTCAAACTGGACACACTGTTGAAGCTAGTGGACATCAAAGGAACTGACGGAAAGACCACTCTCTTGCATTTCGTTGTACAGGAAATTGTTAGGACTGAGGGTTCTCATATTTCCGGTTCTAACCATCACCAAACCTCAGAGAACAACCAGCAATATAGTCTTCAAGATGAAGTGAACTTTAGGAAGCTTGGACTGCCAGTTGTTTCAGGCTTGAGTGGGGAGCTCACCAATGTAAAAAAAGCAGCTGCTATGGATTCAGACATGCTTAGTGGTGATGTCGCTAAACTCGCCAGAGGAATTGAAAAAGTGGTGGAAGTTATCCAATTGAATGAGAAGTCACCTTTGAAAGAAACCAGCCAAAAATTTTCTGAGGCAATGAAAGGTTTCTTGGAGAAGGGAGAAGAAGAGATCTTAAGAATCCAGACCCAAGAGAAGATTGCTCTCACATCAGTAAAGGAGATAACTGAGTATTCCATGGAAATTCAGCAAAGGAAGAAGCTCATCCGTTTAGAATTTTTATGGTTGTGA 2337 0.5066 MCHHTLSVLLFSFLLCCCSSPSAAAQRRLLHQPLFPAVPIPPIQPPTPSPEPQPQHQQPKLPFSSTSSPPSSPSAPKNSFFPSYRSPPPLPPSPPMVATFPANISSLLIPHPSARTTHRPALALALSLSLLFLALLSAAAAFALHRRRRSATSAAADDDDDKGSGSDTLRLYPRNAATSDGVVHHHQKPRGGASSPRPEYLYLGTVARSEPSDSSCCSSTNDGDVRPPPYRKLGDSPELKPLPPLPRHNFRPWLSEEEDNEEKKNENEEDEEEEEFFSPRGSSGNKQLQRSFTSRTPSYPRSNSLSNSHSSSPLSPRSIRSLPRQNPLSASHSPSFSSLSSSPKDFPAIKLAPPPPPPPPPPPPRFWETPVVNRSESEETPKPKLKALHWDKVKASSDRAMVWDRLRPSSFQLNEDMIETLFMVNNAKENPALALRDNARRQMVHSSAVPLENRVLDPKKSQNIAILLRALNVTIDEVCEALREGNCDTMGTELLESLLKMAPTKDEESNLKEFRDESPFKLGPAEKFLKVMLDIPFAFKRVDAMLYIANFDSELEYLDKSFETLEVACEELRNSRMFLKLLEAVLRTGNRMNVGTNRGDAHAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIVRTEGSHISGSNHHQTSENNQQYSLQDEVNFRKLGLPVVSGLSGELTNVKKAAAMDSDMLSGDVAKLARGIEKVVEVIQLNEKSPLKETSQKFSEAMKGFLEKGEEEILRIQTQEKIALTSVKEITEYSMEIQQRKKLIRLEFLWL* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1368 778 MobiDBLite consensus disorder prediction 348 368 - -
Dod04g1368 778 MobiDBLite consensus disorder prediction 150 167 - -
Dod04g1368 778 MobiDBLite consensus disorder prediction 149 382 - -
Dod04g1368 778 Coils Coil 253 275 - -
Dod04g1368 778 PANTHER FORMIN-LIKE PROTEIN 2 10 760 - -
Dod04g1368 778 Gene3D Formin, FH2 domain 372 775 IPR042201 -
Dod04g1368 778 MobiDBLite consensus disorder prediction 58 81 - -
Dod04g1368 778 ProSiteProfiles Formin homology-2 (FH2) domain profile. 375 778 IPR015425 -
Dod04g1368 778 PANTHER FORMIN-RELATED 10 760 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod04g1368 778 MobiDBLite consensus disorder prediction 280 344 - -
Dod04g1368 778 MobiDBLite consensus disorder prediction 40 87 - -
Dod04g1368 778 MobiDBLite consensus disorder prediction 261 276 - -
Dod04g1368 778 MobiDBLite consensus disorder prediction 208 222 - -
Dod04g1368 778 Pfam Formin Homology 2 Domain 377 765 IPR015425 -
Dod04g1368 778 MobiDBLite consensus disorder prediction 40 57 - -
Dod04g1368 778 SUPERFAMILY Formin homology 2 domain (FH2 domain) 354 766 - -
Dod04g1368 778 SMART it6_source 375 778 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1368 Dod-Chr4 34998299 35002612 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1368 99 760 FH2 protein (formin) Gene Family AT2G43800 48.801 5.44e-177 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1368 - - adu:107480832 882.478