Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1361 ATGGGCGACCCCGACGTTGGGCGTTGGCTGTTGGAATTCCTTGCTCACCAGACAAGGACAACAAGAGGGCTCGCGAATACCCTCATCAACAAAATCGCTCCCGCAATCCCTATTTCAAACTCCGATTTCCGCACCAAGAAGACCTTGCTCCTCACCATCCTCCAACATCAGTTTTCCACCCTCTCCATTCAAGAAGACATGCTCCAAAAGCTTGAGGTGCTCGAGGAACTCCACCGCCTCTCCTCTTCTCCCGTCTCCCCCTCCCTCTCCGCCGCCTATTGCGCCGTCGCCGTCCACTGCACCCTCAGGTGCCTCCGTCTGGAACCCCCTTCCGGCTACCTCAGCGCCGTCAACAGGATCTGGCGGGGTCGGGTTCGCGAGATGGAACCCTACTCCCTCTTGTTCTCCGAGGAGTTGAATCGGTGGACCGGCGACATTGAAGCTTCGCTTCGGGGCACAGAAATGATGGAGAGGTTGCGGAGCATGGATAGCAGAAGTGACGCCATTGAGAAGCTTAAGCTTTGTTTGGATGACGCCTGGGAAGATTTGGGTCCTTCTTTTCTTGAGCTTGCGTACTCCATGCTCTCTTCTTCGGATACCGCCCCCGCTGCCTCCACTCCACACATCCACACAGCGAAAGATATGAACCCGTTGCCTCCTATTGAAAATCAGAATATAGATGCACCCGCTGAAGATCAGAGTCCAGTTGCACCTGTCGAAGATGCTCCAATTGAAAATCAGAGCACAGATGCTCCAATTGAAAATCAGAGTCCTGCTGATAATCAGAGTCCAGATGCGTGTATTGAAAATGAAAGTGCAGATGGTGTGGATTTTCAGGAGCAACATGTTTGCCAGACTGTTCATGGTGATGATGATCTTGCCAAGACAAATACTGCATGCCAGAGCAAAGCTCGTCGCCCGAGTTTTATGGAAAGAAATAACACTGCTCATACTTATGAGTGGGATAAATCAGCAGATGGCTTCGAGGAGGAAACATCAAGTCATGCTTGTAGAATTCAGTTGCCTAGCCCAAAGAGGAAGAAAACGTCTCCATTGAAAAAGTATGAACCGGCAAAAATTGTGAGAAGGAGAAAAGCGAAAAAATGGAGTGCATTGGAAGAGGAAACATTAAGGGATGCTGTAAACAAATTTGGTGAAGGAAATTGGAAGTCAATCCTGGATTCCCACAAAGATATATTTGATGAGAGAACTCAAGTTGATTTGAAGGATAAATGGAGAAACCTCAAACGATATGGAGCCAAATAG 1266 0.4897 MGDPDVGRWLLEFLAHQTRTTRGLANTLINKIAPAIPISNSDFRTKKTLLLTILQHQFSTLSIQEDMLQKLEVLEELHRLSSSPVSPSLSAAYCAVAVHCTLRCLRLEPPSGYLSAVNRIWRGRVREMEPYSLLFSEELNRWTGDIEASLRGTEMMERLRSMDSRSDAIEKLKLCLDDAWEDLGPSFLELAYSMLSSSDTAPAASTPHIHTAKDMNPLPPIENQNIDAPAEDQSPVAPVEDAPIENQSTDAPIENQSPADNQSPDACIENESADGVDFQEQHVCQTVHGDDDLAKTNTACQSKARRPSFMERNNTAHTYEWDKSADGFEEETSSHACRIQLPSPKRKKTSPLKKYEPAKIVRRRKAKKWSALEEETLRDAVNKFGEGNWKSILDSHKDIFDERTQVDLKDKWRNLKRYGAK* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1361 421 PANTHER MYB TRANSCRIPTION FACTOR 1 418 - -
Dod04g1361 421 PANTHER MYB TRANSCRIPTION FACTOR 1 418 - -
Dod04g1361 421 MobiDBLite consensus disorder prediction 199 236 - -
Dod04g1361 421 ProSiteProfiles Myb-like domain profile. 361 416 IPR001005 -
Dod04g1361 421 Pfam Myb-like DNA-binding domain 367 416 IPR001005 -
Dod04g1361 421 MobiDBLite consensus disorder prediction 248 268 - -
Dod04g1361 421 CDD SANT_TRF 367 417 - -
Dod04g1361 421 MobiDBLite consensus disorder prediction 248 269 - -
Dod04g1361 421 Gene3D - 359 419 - -
Dod04g1361 421 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 368 420 IPR017930 -
Dod04g1361 421 SUPERFAMILY Homeodomain-like 368 419 IPR009057 -
Dod04g1361 421 SMART sant 365 418 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1361 Dod-Chr4 34924442 34928560 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1361 8 415 Single Myb Histone (SMH) Gene Family AT1G15720 27.660 2.02e-26 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dod04g1361 Myb_DNA-binding 1.1e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1361 - K11111 ccaj:109817184 320.472