Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1354 ATGATGGAGCTAGCAATGGAAGCTTTGCTACTTACTGTTCTTCTCTCCATCATCATTTCAGTTGCTGCTATCTCACCAGGCTCAACCCTTTATGCTTCAGACATAAGCAAAACATGGTCCTCTCCCAACAACACATTCTCCCTTCATTTCATTCCTGTAAAACCGCCAACGTACGCTCCTTCATTTATGGTTGGTATTGTCCACTCTGGAGGTGTCCCTGTCATTTGGACTGCAGGTCATGGCGCCACCGTGGACTACCGCGGCTCATTCCGGTTCCTCTCCTCCGGCAGCCTTTGCCTTGTTAATGGTTCCGGCGCCACGGTTTGGGACTCTGGAACTTCCCATCTGGGTGTCTCCTCTGCCTTCCTTGATGAACAAGGCAACTTGGTTCTCTCTAATGGCACTGGTGGCGCTGTGTGGTCCAGCTTTGACCGTCCCACCGATACCATTGTACCCTCTCAAAGCTTCACAGTTGGTATGGTTTTGAGGTCTGGTTTGTATTCATTTAGGCTTGTTTCTTTGGGCCATATGATACTTGAGTGGAATGATAGTGTTGTGTACTGGGATAAAGGGAATGATCCAAAGCTTTATCATATACTCATTGTTGCTGGTGCTGTAAGTGGCTATGCAGAAGGAAATGGTGAGCTGAGAATCATGAAGTTGGATAGTGATGGGAATTTGAGGATTTATAGCTCTTTTAAGGGAAGTGGATCTGCAGAGATAAAGTGGGTTGCAGTTGAAGATCAATGTGAGGTTTTTGGATATTGTGGAATGAATGGTATTTGTAGATACAAGGATTTGGTTCCTGTTTGTGTATGCCCGTCTCATAATTTTGAGACGATTGATCCAAATAATAGTAGGAAAGGGTGCAGGAGGAAGGTGAAGCTGGAGGATTGTCTTGGAAAGGAGACTATGGTGAACCTGGACCATGCTCAATTCTTGACGTATCCTCCTCAAACTGACTCGGATATTTTTTTTATTGCATTATCCACTTGTAGAAGAAATTGTCTGTCAGGTATTTATTGTTTTGCATCCACTTTATTGGCTGATGGATCAGGACAATGTTATATTAAGGGGACAACAGATTTTATTAGTGGTTATCAGAGTCCAGCCCTACCTAGCACTTCATATATCAAGGTATGTCCACCAGTGGATCTAACAGACGCACTACCGCTTCCTGGGAAGGGAAGGGATCAGAGTAAGCATTCTCGGCTAGTAATAGTTGTTGTTTTGGGTACCCTCTTGGTTCTGATTTCCTTTCAGGTTGGTTTATGGTTGTGGTGTAGAAGATACAGTCCAAGGTTTGGAGGACTTTATGATCAGTATGCTCTTTTAGAGTATGCTTCTAGTGCACCGGTCCCGTTCTCATACAAGGAGCTGCAAGAATTGACAATGGGGTTCAAGGACAAGCTTGGTGCTGGAAGATTTGGTTCCATTTATAAAGGGATTCTAGGAAATGGAATGGCCATAGCAGTTAAGAAATTTGAAGGGATTGAACAAGATGAGAAACAGTTTAGGGTGGGAGCTGCTACCATATGCAATACCCACCATTTGAATTTGGTGAGAATGATTGGTTTTTGCTCTGAAGGACACCACAGGCTTTTAGTATATGAGTTCATGAAAAATGGGTCTCTTGATCAGTATCTTTTTGGGACAGAAAATCAGCCTGGAACATCATTAGATTGGCAGTGTCGGTTCAACATTGCCCTTGGCGTTGCAAAGGGCATCACCTATCTTCATGAGGGGTGCTGTAACTGCATGCTCCACTGTGACATAAAACCTAATAACATTTTTTTAGATGAGAATTTCAAGGCTAAACTCACGGACATTGGCCTTGTAAGCCTCGTTAGTCCTAAGGACCACATGCACCGAACCTCTTCAATTGTGAAAGGAACCAAAGGATATGTAGCTCCAGAACTGCTTTTAAATCCTTCAATGACTTCGAAATGTTATGTTTACAGCTATGGTATGGTTTTACTGGAGATAGTAAGTGGAAGGAGGAACTATGAAGTCCCAGAAGAAAGCTACACTAAAAAAGAGTTCTCAGCTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATCAAGGGCATTGTTGACAAAAGACTAAATGAGCATGAGGTTGATTTGGAGCAAGTGAAAAGGGTCATTGTGGCAAGCTTTTGGTGCATCCAGGAGCAGCCAGAGCATAGGCCAACGATGGGCAAGGTCTTGCAAATGCTGGAAGGTATTACAGAGGCTGAGAAGCCACCACCCCCAAAATCTGAGAATAGAGAATCTTTCACTGAGCCAACTTGTTCTTCCCCTTCGTCTTCATCACTCGAGATTATTGGTTTTTCTCCTCTGCAAATCGAAAGGAACATCGAAAGAGAAACATTATCCTTTTTATTTTCAAAAGAATAG 2400 0.4325 MMELAMEALLLTVLLSIIISVAAISPGSTLYASDISKTWSSPNNTFSLHFIPVKPPTYAPSFMVGIVHSGGVPVIWTAGHGATVDYRGSFRFLSSGSLCLVNGSGATVWDSGTSHLGVSSAFLDEQGNLVLSNGTGGAVWSSFDRPTDTIVPSQSFTVGMVLRSGLYSFRLVSLGHMILEWNDSVVYWDKGNDPKLYHILIVAGAVSGYAEGNGELRIMKLDSDGNLRIYSSFKGSGSAEIKWVAVEDQCEVFGYCGMNGICRYKDLVPVCVCPSHNFETIDPNNSRKGCRRKVKLEDCLGKETMVNLDHAQFLTYPPQTDSDIFFIALSTCRRNCLSGIYCFASTLLADGSGQCYIKGTTDFISGYQSPALPSTSYIKVCPPVDLTDALPLPGKGRDQSKHSRLVIVVVLGTLLVLISFQVGLWLWCRRYSPRFGGLYDQYALLEYASSAPVPFSYKELQELTMGFKDKLGAGRFGSIYKGILGNGMAIAVKKFEGIEQDEKQFRVGAATICNTHHLNLVRMIGFCSEGHHRLLVYEFMKNGSLDQYLFGTENQPGTSLDWQCRFNIALGVAKGITYLHEGCCNCMLHCDIKPNNIFLDENFKAKLTDIGLVSLVSPKDHMHRTSSIVKGTKGYVAPELLLNPSMTSKCYVYSYGMVLLEIVSGRRNYEVPEESYTKKEFSAWAYEEFEKGNIKGIVDKRLNEHEVDLEQVKRVIVASFWCIQEQPEHRPTMGKVLQMLEGITEAEKPPPPKSENRESFTEPTCSSPSSSSLEIIGFSPLQIERNIERETLSFLFSKE* 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1354 799 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 8 191 - -
Dod04g1354 799 PIRSF SRK 203 787 IPR024171 GO:0004674
Dod04g1354 799 PIRSF SRK 1 199 IPR024171 GO:0004674
Dod04g1354 799 Pfam D-mannose binding lectin 74 158 IPR001480 -
Dod04g1354 799 MobiDBLite consensus disorder prediction 757 773 - -
Dod04g1354 799 MobiDBLite consensus disorder prediction 745 773 - -
Dod04g1354 799 SMART blect_4 29 146 IPR001480 -
Dod04g1354 799 Gene3D Phosphorylase Kinase; domain 1 440 539 - -
Dod04g1354 799 SUPERFAMILY Protein kinase-like (PK-like) 449 741 IPR011009 -
Dod04g1354 799 SMART serkin_6 465 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1354 799 PANTHER OS07G0415500 PROTEIN 8 191 - -
Dod04g1354 799 ProSiteProfiles Protein kinase domain profile. 465 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1354 799 Pfam Protein kinase domain 468 738 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1354 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Dod04g1354 799 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 191 757 - -
Dod04g1354 799 Gene3D Transferase(Phosphotransferase) domain 1 540 761 - -
Dod04g1354 799 PANTHER OS07G0415500 PROTEIN 191 757 - -
Dod04g1354 799 Gene3D - 20 145 IPR036426 -
Dod04g1354 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 169 IPR036426 -
Dod04g1354 799 ProSiteProfiles Bulb-type lectin domain profile. 15 144 IPR001480 -
Dod04g1354 799 Pfam S-locus glycoprotein domain 212 274 IPR000858 GO:0048544
Dod04g1354 799 ProSitePatterns Protein kinases ATP-binding region signature. 471 494 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1354 Dod-Chr4 34856057 34859739 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1354 406 750 Receptor kinase-like Gene Family AT5G20050 37.255 5.25e-66 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Dod04g1354 Pkinase 4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1354 - - gmx:100810753 931.784