Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1351 ATGATGGGACATAAAAGGAGCCCTTGTTCTGTTGACCAAAGCAGTTATACTTCTATTGCATCTAAAAGGCAAAAGGCTGATTTATCAATCACCACAAAGGAGAGGAAGGAGAAGCTTAGTGAACGAATTGTTGCTCTGCAGCAGCTTGTTTCACCATATGGGAAGACGGATACATCTTCTGTCCTAAAGGAGGCAATGGAATACATAGGTTTCCTTCATAAACAAGTTAAGCTGCTTAGTGCTCCTTACCTTGAAAGTTCTCCATCAGCCAAGATGCAGGGTTCAGAGCCATGCAGCCTGAGAAGTAGAGGGTTATGTCTTGTTCCTGTCTCATTAACAATTGGAGTTGCAGAGAGCAATGGTGCAGATATCTGGGCTCCCATCAAGACTACTACTTCACCAAAACTTGAGAACGATATCTCTCAATTCCATTGA 435 0.4276 MMGHKRSPCSVDQSSYTSIASKRQKADLSITTKERKEKLSERIVALQQLVSPYGKTDTSSVLKEAMEYIGFLHKQVKLLSAPYLESSPSAKMQGSEPCSLRSRGLCLVPVSLTIGVAESNGADIWAPIKTTTSPKLENDISQFH* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1351 144 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 23 72 IPR011598 GO:0046983
Dod04g1351 144 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 1 123 - -
Dod04g1351 144 Gene3D - 20 91 IPR036638 GO:0046983
Dod04g1351 144 SMART finulus 29 78 IPR011598 GO:0046983
Dod04g1351 144 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 27 86 IPR036638 GO:0046983
Dod04g1351 144 CDD bHLH_AtbHLH_like 29 80 IPR045239 -
Dod04g1351 144 MobiDBLite consensus disorder prediction 1 22 - -
Dod04g1351 144 MobiDBLite consensus disorder prediction 8 22 - -
Dod04g1351 144 PANTHER TRANSCRIPTION FACTOR BHLH154 1 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1351 Dod-Chr4 34824574 34829366 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1351 1 136 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 53.165 4.83e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1351 - - gmx:100527660 266.544