LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod04g1294	ATGAACTTCAGGAGCTATGGTGATATCCTTAACCGCACTGGGGATGGCATGGGTGGGAAGCAACCTGCAAATGCCAATCTGGTAAGGCAGTCCTCAATTTACTCTCTCACTCTTGATGAGTTACAGAACACCATGGGTGGGATTGGGAAGGACTTTGGATCCATGAACATGGATGAACTCTTGAAGAACATATGGACTGCTGAGGAGTCTCAGGCCTTGGCATTTTCAGCCGGTGTTGGAGGAGGAGGTGGTGATCACAACCCAAGTGGTAGCTTGCAAAGACAAGGCTCTTTGACATTACCAAGGACTCTTAGTCAGAAGACAGTTGATGAGGTTTGGAGGGACTTGATCAAAGATAGTGGTGGTGGGGTTAAAGATGGGAGTGGCAATGGTGGTTCATCTATGCCTCAGAGGCAACCAACACTAGGAGAAATGACACTGGAGGAGTTCTTGGTGAGAGCTGGGGTTGTAAGAGAAGATGCACCTCAACAAATGGGAAGGCCAAATACTAATGGATGGTATGGTGGTGACTTTACTAGATCAAACAATAACAATGCTCTACTTCTTGGGTTTCAACAGCCAAATAGAAGCAATGGTAATAATCTTGGCAACAGGATTGTGGATGGCAATAACTTAATTCCTAAGCATCCTCCTCCTTTGTCATTAAACTCAAACCATTCTCAGCAGCACCAAGCACAACACCAGCACCAGCAGCCGCTGCCGCTTTTTCCGAAACCTGCGAGTGTGGCTTTTGCTGCTCCCATGCACATGTTGAACAATCCTCAGCTTGCAAACCCTGGCACAAGGGGAGGTTTGATTGGAGTTCCAGAGCATTCAATGAATGGAGCAGTAGTTCAAAGCAGTGCACTACCACGTGTTGGAATGGTTGGTTTAGCTGCGGCCAATGGCTCGGCTCCATGTGCTTCTCCTGCAAATAAGACGTCACCGGATGTAATTGCGAAGAGCAATGGGGATACGACTTCACTGTCACCACTTCCTTATGTAATCAACAGGGGAAGGAAGTGCGGTGCAATAGAGAAAGTGGTTGAGAGGAGACAAAGGAGAATGATAAAAAATAGAGAATCAGCCGCGAGGTCACGGGCTCGCAAGCAGGCCTACACTTTCGAGCTAGAGGCTGAAGTTCAAAAGCTTAAGGAAATAAACAGAGAACTACAAAGAAAACAGGCAGAAATTATGGAAATGCAGAATAATCAGAATATGGTCTCTTCGTTCCGGTCATTGGGAAACAAAATAAAATGCTTGAGAAGGACACTTACTGGTCCATGGTAG	1290	0.4636	MNFRSYGDILNRTGDGMGGKQPANANLVRQSSIYSLTLDELQNTMGGIGKDFGSMNMDELLKNIWTAEESQALAFSAGVGGGGGDHNPSGSLQRQGSLTLPRTLSQKTVDEVWRDLIKDSGGGVKDGSGNGGSSMPQRQPTLGEMTLEEFLVRAGVVREDAPQQMGRPNTNGWYGGDFTRSNNNNALLLGFQQPNRSNGNNLGNRIVDGNNLIPKHPPPLSLNSNHSQQHQAQHQHQQPLPLFPKPASVAFAAPMHMLNNPQLANPGTRGGLIGVPEHSMNGAVVQSSALPRVGMVGLAAANGSAPCASPANKTSPDVIAKSNGDTTSLSPLPYVINRGRKCGAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVQKLKEINRELQRKQAEIMEMQNNQNMVSSFRSLGNKIKCLRRTLTGPW*	430

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Dod04g1294	429	Pfam	bZIP transcription factor	351	402	IPR004827	GO:0003700\|GO:0006355
Dod04g1294	429	MobiDBLite	consensus disorder prediction	217	238	-	-
Dod04g1294	429	SMART	brlzneu	347	405	IPR004827	GO:0003700\|GO:0006355
Dod04g1294	429	PANTHER	ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7	21	429	-	-
Dod04g1294	429	MobiDBLite	consensus disorder prediction	77	96	-	-
Dod04g1294	429	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	349	400	IPR004827	GO:0003700\|GO:0006355
Dod04g1294	429	PANTHER	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	21	429	IPR043452	GO:0003700\|GO:0045893
Dod04g1294	429	MobiDBLite	consensus disorder prediction	217	240	-	-
Dod04g1294	429	CDD	bZIP_plant_BZIP46	351	402	-	-
Dod04g1294	429	Gene3D	-	349	406	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod04g1294	Dod-Chr4	34075950	34079387	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod04g1294	1	429	bZIP Transcription Factor Family	AT4G34000	45.148	1.44e-104	316

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Dod04g1294		bZIP_1	4.1e-11	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod04g1294	K14432		-	gmx:100776600	506.523

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