Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1288 ATGCTCTTCTTCTTTGGGTTGCTGGCTTTTCTTGGAATGCAGCTCCCTCTAATAATGGCTGATTGCCCTTTGGATTTTACTGGTTCAAACTTTACACGGGCATCCTCTCTATGCTCTAACCATGGTGACAGGAACAACTGTTGCCGCTACATTAATGTTAACATTGCAATTTCTGTTGCTCGTTATGCTAATGCAACAAGCATCCTGGGGGTCCCTCCAAATGCCTCTGACACCTGCCTCCAAACCATATCTCAAAAATTACAACTTGATGGAGTTCCACAAAATGCAACAGTTTTCTGTGGTTTTGGGACAAAAATTCCTGTTAATTATGAATGCAAGGGTCGAACTAGTGTCATGCAGATGCTGCAGTCTCCTAGATTTGTTGAGGTCATAAAAAATTGCAAAGTGCCACTTGGAGAGGAAAGTAAATGTAAGAAGTGCTTAAATGCAGGCTTTGGTTATCTACATCATCTGGAAATTGAAGATAATATAACACTGAGTACATGTCGTGATGCCACTTTTGTTGCACTTGCAAGCCAAGTTGATGAGATATCTGCAGTTGACATAGCAAGTTGTTTCTTTGGAGTTCAAGGACTTCTACAGCTTCCTGTTACAGAGTCATCCCCATCAGTACGTACTCCTGAGGCTTCTCCAAGTCCAAGGGTTGCTGATAGCCCAAGTCAGTTATTGTTAGATGCACCTTTTAAGGGAAACCACCATTCATATCACTTGATGTTAGTTCCAGGTATTGCTATTGCCGTCACAGCTGTTGCTGTTGTGATGCTCATAGTCTTGATAGTTCTAATTCGCCAGAAAAGCAGAGAGCTTGAAGGGCCTGATACTTTCGGAAAACCTCCTTCAAAAGCCTTACCTCCTTGTACAACATGGAAATTTCAAGAAGGTTCTTCATCTATGTTCCGAAAATTCAGCTACAAGGAGATAAAGAAGGCGACAGAGGATTTTAGCATCATCATTGGGCAAGGGGGATTCGGAACAGTGTATAAAGCTCATTTTAGTGATGGCCTGGTGGCAGCAGTAAAGCGGATGAACAGAGTGTCAGAGCAGGGGGAGGATGAGTTCTGCAGAGAAATTGAGCTTCTTGCTCGGCTGCACCATCGGCATCTTGTTGGTTTAAGAGGCTTCTGCATTAAAAAAAATGAGAGGTTTCTATTGTATGAGTACATGGGAAATGGAAGCTTGAAAGATCATCTTCATTCCCCCGGTAAAACACCTCTAAGTTGGCGAACTAGAATCCAAATTGCAATTGATGTGGCAAATGCACTGGAGTACCTTCATTTCTATTGCGATCCTCCTTTGTGCCATAGAGACATCAAGTCTAGCAACACTTTACTGGACGAGACGTTTGTTGCTAAGATAGCTGATTTTGGCCTTGCACAAGCTTCAAAAAATGGTTCGATATGCTTTGAACCTCTAAACACGGAAATCCGAGGTACTCCAGGTTATATGGATCCTGAATATATAGTTACTCAAGAGCTCACCGAGAAAAGCGATATATACAGTTTTGGGGTGCTACTACTTGAAATTGTGACAGGAAGGCGAGCTATTCAAGATAACAAGAATCTGGTGGAATGGGCTCAACCATACATGGAATCAGAAGCGCGATTATTGGAGCTAGTAGATCCCAACGTGAGGGAGTCTTTTGACTTGGATCAACTCCACACAGTAGTGTCTATAGTAGGGTGGTGCACCCAGAGAGAAGGAAGGGCAAGGCCTTCAATAAAACAGGTCCTTAGGCTTCTGTATGAGACATCAGAACCAATGCACAGCGGGTTTCTACAAGCTGATGAAGATGAAGAATGCCAGGGGAGTCAGCAGAGAGGCAGAAGAAGCAAGGGAAAAATGCTCCGGAACGAAGCGATCTTTCACAGCGGGGATGGAAGATATCTTGCTTCGTCTTCAAGCACGTCACAATCGTATTGCAGTAGAACCTTTTTACTTGAGAATGGCTCTCCACAGTCCCCGCCAAATATTTTTTCAGTCTGA 2004 0.4336 MLFFFGLLAFLGMQLPLIMADCPLDFTGSNFTRASSLCSNHGDRNNCCRYINVNIAISVARYANATSILGVPPNASDTCLQTISQKLQLDGVPQNATVFCGFGTKIPVNYECKGRTSVMQMLQSPRFVEVIKNCKVPLGEESKCKKCLNAGFGYLHHLEIEDNITLSTCRDATFVALASQVDEISAVDIASCFFGVQGLLQLPVTESSPSVRTPEASPSPRVADSPSQLLLDAPFKGNHHSYHLMLVPGIAIAVTAVAVVMLIVLIVLIRQKSRELEGPDTFGKPPSKALPPCTTWKFQEGSSSMFRKFSYKEIKKATEDFSIIIGQGGFGTVYKAHFSDGLVAAVKRMNRVSEQGEDEFCREIELLARLHHRHLVGLRGFCIKKNERFLLYEYMGNGSLKDHLHSPGKTPLSWRTRIQIAIDVANALEYLHFYCDPPLCHRDIKSSNTLLDETFVAKIADFGLAQASKNGSICFEPLNTEIRGTPGYMDPEYIVTQELTEKSDIYSFGVLLLEIVTGRRAIQDNKNLVEWAQPYMESEARLLELVDPNVRESFDLDQLHTVVSIVGWCTQREGRARPSIKQVLRLLYETSEPMHSGFLQADEDEECQGSQQRGRRSKGKMLRNEAIFHSGDGRYLASSSSTSQSYCSRTFLLENGSPQSPPNIFSV* 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1288 667 CDD STKc_IRAK 325 587 - -
Dod04g1288 667 Pfam Protein kinase domain 324 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1288 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Dod04g1288 667 ProSiteProfiles Protein kinase domain profile. 319 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1288 667 Pfam SPARK 21 157 IPR043891 -
Dod04g1288 667 PANTHER BNAC06G02630D PROTEIN 4 667 - -
Dod04g1288 667 ProSitePatterns Protein kinases ATP-binding region signature. 325 347 IPR017441 GO:0005524
Dod04g1288 667 PANTHER OS01G0750732 PROTEIN 4 667 - -
Dod04g1288 667 Gene3D Transferase(Phosphotransferase) domain 1 395 612 - -
Dod04g1288 667 SMART serkin_6 319 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1288 667 SUPERFAMILY Protein kinase-like (PK-like) 300 590 IPR011009 -
Dod04g1288 667 Gene3D Phosphorylase Kinase; domain 1 294 394 - -
Dod04g1288 667 MobiDBLite consensus disorder prediction 600 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1288 Dod-Chr4 34013991 34020947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1288 17 666 Receptor kinase-like Gene Family AT3G19300 60.398 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Dod04g1288 Pkinase 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1288 - - ahf:112715638 1165.6