Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1280 ATGGCGCAGGCAATCGAACAAGTCCAATGCTTCGGTCGGAAGAAGACGGCGGTGGCCGTCACCTACTGCAAGCGTGGCCGCGGCCTCATCAAGATCAACGGGTGCCCAATCGAGCTGGTGGAGCCCGAGATCCTCCGCTTCAAGGCCTTCGAGCCCGTCCTGTTATTGGGGAAGAGCCGCTTCGCCGGCGTCGACATGAGAATCCGCGTGAAGGGCGGAGGACACACCTCGCAGATCTACGCCATCAGGCAGAGCATAGCGAAGGCGCTGGTCGCGTTCTACCAGAAATACGTTGACGAGCAGAGCAAGAAAGAGATCAAGGACATCCTCGTCAGGTACGATCGTACCCTCCTCGTTGCCGATCCCAGGCGCTGCGAGCCCAAGAAGTTCGGTGGTCGCGGCGCACGTGCCAGGTTCCAGAAGTCATACCGTTGA 435 0.6 MAQAIEQVQCFGRKKTAVAVTYCKRGRGLIKINGCPIELVEPEILRFKAFEPVLLLGKSRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRYDRTLLVADPRRCEPKKFGGRGARARFQKSYR* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1280 144 SUPERFAMILY Ribosomal protein S5 domain 2-like 7 144 IPR020568 -
Dod04g1280 144 PANTHER - 3 144 - -
Dod04g1280 144 Gene3D - 1 144 IPR014721 -
Dod04g1280 144 ProSitePatterns Ribosomal protein S9 signature. 72 90 IPR020574 GO:0003735|GO:0005840|GO:0006412
Dod04g1280 144 Pfam Ribosomal protein S9/S16 12 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
Dod04g1280 144 PANTHER RIBOSOMAL PROTEIN S9 3 144 IPR000754 GO:0003735|GO:0005840|GO:0006412
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1280 4 144 Cytoplasmic Ribosomal Protein Gene Family AT2G09990 88.652 2.28e-92 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1280 K02960 - gmx:100779794 281.567