Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1263 ATGGTTTTCTTGAAGCAAATTTCAGCTTCAACGTTGCTCATCACCTTCCTAGTTCTTTGCGTTCCCTTGGTAGATTGCCAGATCCTCGAATCCTCACCACCACAACAACCAACCCAATTAGTCCCAGATATTTTAAGCTTCTTAGACAAGAGGCTGGCTCTTGTCTTCCCAATCATTCAAACCTTCAAGAAAGCAATCACCTCAGACCCATTCGGAGTAACCGCGACCTGGGTGGGTCCAAACATATGCAACTACACAGGCTTCTACTGCGACAGCCCACCAGACAACCTAACCGCCACAACCATCGCCTCCATAGACTTCAACGGCTTCCGGCTCGCCGCCCCCACCCTCGACGGCTTCATCGACCAGCTCCCAGACTTAGCAATCTTCCACGCCAACACCAACAACTTCTCCGGCACCATTTCACCCAAAATAGCAGCACTCAAGTACCTCTACGAACTAGACGTGAGTAACAATTTACTCTCCGGGGCATTCCCCGTTTCGGTACTGAACATGCCCACCTTATCCTTCTTGGACATTAGGTACAACTTCTTCACCGGCACCGTGCCAGCACAGATCTTCACGCAAAAATTGGATGTGCTTTTCCTCAACAACAACAACTTCATGCTGACGCTGCCAAACAACCTAGGTGACACAACAGCGCTATATCTCACTTTGGCCAACAACAAATTCACGGGCCCTATTCCCCGCAGCATTGGAAAAGCCTCGTCCACATTGATCGAAGTGTTGCTCTTGAACAACCTCTTAACGGGTTGTTTGCCGTACGAAATCGGGTTCCTGAGAAAGGCCAAGTTGTTCGATGCCGGAAACAACCTCTTGACAGGGCTGTTGCCGTGCTCCTTCGGGTGCTTGGAGAGCGTGGAGCAGTTAAACCTCGCTGGGAACTTGTTGTACGGACAGGTTCCGGAGGTGGTCTGCGCGTTGGGGAACTTGGCGAATCTGTCGCTGTCGCATAACTACTTCACGAAGGTTGGGCCGTTGTGCAAGAAGCTGATCAGGAGAGGCGTTCTTGATGTGAGGAAGAACTGTATCTCTGGGCTTCCGTATCAGAGGTCGGTGCAGGAGTGTATGGCGTTCTTCTTGCTGCCGAGACCTTGTTCCTACCCGGCGTCATTTAACATCATACCGTGTAAGATTCCACCGTGGAGGAAACATCAGGGGACAACTAACAAGAGGCATCTGCTGTCATATTCTGCTCTTTCCAGAAACAGAGTAGTTTTGTAA 1245 0.5036 MVFLKQISASTLLITFLVLCVPLVDCQILESSPPQQPTQLVPDILSFLDKRLALVFPIIQTFKKAITSDPFGVTATWVGPNICNYTGFYCDSPPDNLTATTIASIDFNGFRLAAPTLDGFIDQLPDLAIFHANTNNFSGTISPKIAALKYLYELDVSNNLLSGAFPVSVLNMPTLSFLDIRYNFFTGTVPAQIFTQKLDVLFLNNNNFMLTLPNNLGDTTALYLTLANNKFTGPIPRSIGKASSTLIEVLLLNNLLTGCLPYEIGFLRKAKLFDAGNNLLTGLLPCSFGCLESVEQLNLAGNLLYGQVPEVVCALGNLANLSLSHNYFTKVGPLCKKLIRRGVLDVRKNCISGLPYQRSVQECMAFFLLPRPCSYPASFNIIPCKIPPWRKHQGTTNKRHLLSYSALSRNRVVL* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1263 414 SUPERFAMILY L domain-like 64 352 - -
Dod04g1263 414 Gene3D Ribonuclease Inhibitor 58 360 IPR032675 -
Dod04g1263 414 ProSiteProfiles Leucine-rich repeat profile. 317 338 IPR001611 GO:0005515
Dod04g1263 414 PANTHER SCOPOLETIN GLUCOSYLTRANSFERASE 8 411 - -
Dod04g1263 414 Coils Coil 411 414 - -
Dod04g1263 414 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 8 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1263 Dod-Chr4 33651058 33652817 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1263 45 379 Leucine-rich Repeat extension Gene Families AT3G24480 44.179 7.83e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1263 - - gmx:100813314 625.165