Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1261 ATGGAAAGAACCAAGTCTCTCCTCTGCCTTTCATTCTTGCTATCATTTCTCTTGCTCCACTTTCACTCCCAAAACGGCATCGTCGTTGCTGAAGAAGTAGCAGCATCAGAAAGTGAAGCACTTGGGCTACAAGGAAGAGAAGCGCTTGAAATCATCATAGGTGGAGGAGGTTCCCCTGCACCTTCCCCTGGCAACCCAACTCCATGCCCACCTCCTCCAAAACCCTTGAGCCGCTTGGAGAAAGCACGCCGCGTTCTTCTAAACTTCACAAAGTATATCGACGACCCAAAAGGGTACACGCAAAACTGGTGCCCCGAGAACAAGGACACGTGCAATTTCCGTGGCGTACGGTGTGCCAATTATCCAAACTCAAACGAGCCAGCAGTTGCAGGACTGGACCTTAACACCGCAGGTATCTCTGGCCTTAACCGTACCCCTCTGTCCCTCTCTGGAATCCTCGACAGGATCCCTGAACTCACATTCTTCCACGTCAACTCCAACAACTTCTCCGGCGCTGTCCCAAAAGAGATCATCAAGTACCCTTTCTTCTTCGAGCTTGATCTCAGTAACAACAAGCTTGTCGGTGAGTTTCCACACGAAGCGCTTCAGAACAAGCAACTAGTGTTCTTGGACCTCAGGTTCAACCGCCTGTACGGTCAAGTTCCCTGGCAGCTGTTCACCTTGGATCTGGATGTGATCTTCATCAATAACAACATGTTCAGCCAGCACCTCCCTGAGAATTTCGGGGCCACCCCTGCCAGGTACCTGACCTTCGCCAACAACGAATTCACGGGCCAGATCCCAAGGAGCATTGGAAACGCTGCCAAGACCCTCACGGAAGTGCTTTTCTTGGGGAACAAGTTTGAAGGGTGCTTGCCGTACGAGATTGGGTACTTAAAGAAAGCCACGGTGTTTGATGTGAGCAAGAACTACTTGACTGGTCCGATCCCGCAGTCATTCGGGTGCTTGAGCAAGATTCAGTACCTGAACTTGGCGAGCAACAAATTCTACGGCGCTGTTCCGGAGAATGTTTGTCGGCTTCCTGGGATTTGCCGAAACGGGAACCTGACTCTGTCGAACAATTATTTCACGGAGATTGGGCCAGAATGCAGGAAGCTCATAAAGTCCAAGGTGCTTGACGTGACCAATAACTGCATCCCAGGGCTCCCAAACCAGAGGTCGCACGAAGAATGCTACGAGTTTTTGTACAGGGTGAAGCCGTGTCCGAATGAGAAGTTTCTGCTGAGTTACAGTCCTTGTGAGGGGAAGTGGAAGAAGAGCCAGGACCCTGTTCATGAGGAAGCGGCTCCACCAAAGGAGCCCGTGACTTACAAGTCTCTCAAACCGCATCGGTTGAGGCTTCGATGA 1368 0.5117 MERTKSLLCLSFLLSFLLLHFHSQNGIVVAEEVAASESEALGLQGREALEIIIGGGGSPAPSPGNPTPCPPPPKPLSRLEKARRVLLNFTKYIDDPKGYTQNWCPENKDTCNFRGVRCANYPNSNEPAVAGLDLNTAGISGLNRTPLSLSGILDRIPELTFFHVNSNNFSGAVPKEIIKYPFFFELDLSNNKLVGEFPHEALQNKQLVFLDLRFNRLYGQVPWQLFTLDLDVIFINNNMFSQHLPENFGATPARYLTFANNEFTGQIPRSIGNAAKTLTEVLFLGNKFEGCLPYEIGYLKKATVFDVSKNYLTGPIPQSFGCLSKIQYLNLASNKFYGAVPENVCRLPGICRNGNLTLSNNYFTEIGPECRKLIKSKVLDVTNNCIPGLPNQRSHEECYEFLYRVKPCPNEKFLLSYSPCEGKWKKSQDPVHEEAAPPKEPVTYKSLKPHRLRLR* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1261 455 MobiDBLite consensus disorder prediction 54 75 - -
Dod04g1261 455 Gene3D Ribonuclease Inhibitor 252 401 IPR032675 -
Dod04g1261 455 SUPERFAMILY L domain-like 81 386 - -
Dod04g1261 455 Gene3D Ribonuclease Inhibitor 79 251 IPR032675 -
Dod04g1261 455 Pfam Leucine rich repeat N-terminal domain 82 118 IPR013210 -
Dod04g1261 455 MobiDBLite consensus disorder prediction 61 75 - -
Dod04g1261 455 MobiDBLite consensus disorder prediction 423 455 - -
Dod04g1261 455 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 13 448 - -
Dod04g1261 455 PANTHER BNAC05G26270D PROTEIN 13 448 - -
Dod04g1261 455 MobiDBLite consensus disorder prediction 425 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1261 Dod-Chr4 33615783 33617418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1261 77 442 Trihelix Transcription Factor Family AT4G33970 40.533 8.23e-76 249
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1261 - - cam:101512430 555.058