Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1255 ATGGAGGTTGATGGAGAAGGGTCGTCGCCATCTTACTACAGCATTCTTGGTGTGAGTCCGGATTCTTCCATTGAAGAAATAAAGCGTGCTTACAGGAAGCTTGCTATGCGATGGCATCCAGATAAGTGGACTAGAACGCCTTCTTTGCTGGGTGAAGCCAAGCGCAAGTTCCAGCAAATTCGAGAAGCCTATTCAGTGTTATCTGATCACAAGAAAAGAACGATATACGATGCAGGCTTGTATGATCCTGAAGAAGAGGAGGATGAGGGCTTTTCTGATTTTGTGCAGGAGATGGTGTCCCTAATGGCTCAAGTGAGAAGAGAGGAGAAGGATTATGGTATGGAGGAGTTGCAGTCCATGTTCATGGAAATGGTTGAAGGTTTTGATCAGTCTCCTTCCGTGCATTGTGGGGTGCCTTCGGTGCTTGATGAATCCCTGTGCTCAAAGAGGATGCGTTTGGACCCAAACATGATGGACTACACAGGGTCACATTTTCAAACACCTGGCCTCAACTTCTAG 519 0.4682 MEVDGEGSSPSYYSILGVSPDSSIEEIKRAYRKLAMRWHPDKWTRTPSLLGEAKRKFQQIREAYSVLSDHKKRTIYDAGLYDPEEEEDEGFSDFVQEMVSLMAQVRREEKDYGMEELQSMFMEMVEGFDQSPSVHCGVPSVLDESLCSKRMRLDPNMMDYTGSHFQTPGLNF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1255 172 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 164 - -
Dod04g1255 172 PANTHER PUTATIVE, EXPRESSED-RELATED 1 164 - -
Dod04g1255 172 Pfam DnaJ domain 12 77 IPR001623 -
Dod04g1255 172 SUPERFAMILY Chaperone J-domain 10 83 IPR036869 -
Dod04g1255 172 PRINTS DnaJ domain signature 13 31 IPR001623 -
Dod04g1255 172 PRINTS DnaJ domain signature 31 46 IPR001623 -
Dod04g1255 172 PRINTS DnaJ domain signature 52 72 IPR001623 -
Dod04g1255 172 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Dod04g1255 172 CDD DnaJ 12 69 IPR001623 -
Dod04g1255 172 Gene3D DnaJ domain 2 102 IPR036869 -
Dod04g1255 172 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Dod04g1255 172 SMART dnaj_3 10 72 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1255 Dod-Chr4 33516689 33519924 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1255 12 78 C2H2 Transcription Factor Family AT1G74250 45.588 9.78e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1255 - - gmx:100306079 258.84