Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1254 ATGAAGCGATATGTTTGCATTAGTGATGATGAATCATCACAGGATTTGTACTGTGATAATCGAATATCAAATAGAAAATATACTGTATTGAACTTTATTCCAAAAAATTTATGGGAACAGTTCAGAGGTATGATATGCATTGGACTGAAGCGCTTTCAGAAGGCATTGGACCTTCTACATAATGTTGTAACTGCTCCAATGTCTACATTGAATGCTATAGCCGTTGAAGCTTATAAAAAGTATATATTGGTTTCTCTCATTCATCATGGACAGTACTTCACATTGCTGAATTTCATGTACATGCCTTCCAAGAAAATTGCAGAATTGGAGGCTTATGTCAAGACAAATACAGAGAAGTTTGAAAATGACAACAATCTTGGACTAGTTAAGCAAGTTGTATCATCTATGTATAAGCCAAATATTCAAAGGTTGACCCAGACATACTTGACCCTTTCTCTCCAAGATATTGCCAGCACAGTTCAGTTAAATGGTCCCAAGGAAGCATAA 507 0.355 MKRYVCISDDESSQDLYCDNRISNRKYTVLNFIPKNLWEQFRGMICIGLKRFQKALDLLHNVVTAPMSTLNAIAVEAYKKYILVSLIHHGQYFTLLNFMYMPSKKIAELEAYVKTNTEKFENDNNLGLVKQVVSSMYKPNIQRLTQTYLTLSLQDIASTVQLNGPKEA* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1254 168 Pfam PCI domain 103 164 IPR000717 -
Dod04g1254 168 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 39 93 - -
Dod04g1254 168 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1 39 93 - -
Dod04g1254 168 PANTHER COP9 SIGNALOSOME COMPLEX SUBUNIT 3-LIKE ISOFORM X1 104 168 - -
Dod04g1254 168 Pfam Phospholipid-translocating ATPase N-terminal 11 43 IPR032631 -
Dod04g1254 168 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3 104 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1254 Dod-Chr4 33511054 33512784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1254 1 133 Primary Pumps ATPases AT5G44240 33.835 6.75e-17 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1254 K12177 - gmx:100783340 192.971