Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1248 ATGAAGAGCCAATCAAATCTTTGTGTAACTGCAGGAATTTGTGTGACATGGGGTCTACCAGTAATGATCTTGGTTTATTCTCTCGATCACATCTCCGATGCTCATTTTAATCCAGCAGTCACCGTCAGCTTTGCCATCTATCGTCATTTCCCTCTCACACAGGTGCCTCTATATCTTACAGCGCAAGCGCTAGGAGCTATATTTGCTAGTGGGACATTGTACCTTCTTTTTGATCTGGATGAAAAATCTTATTTTGTAACGGTACCAGCAGGACCTCATGTTCAATCTCGTCTTCGAGATCCTTGCGTCGTTTCTCTTGATGTTTGTTGTCTCTGCAGTTTCCACGGACAACAGAGCAGTTAG 363 0.4353 MKSQSNLCVTAGICVTWGLPVMILVYSLDHISDAHFNPAVTVSFAIYRHFPLTQVPLYLTAQALGAIFASGTLYLLFDLDEKSYFVTVPAGPHVQSRLRDPCVVSLDVCCLCSFHGQQSS* 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1248 120 Gene3D Glycerol uptake facilitator protein. 2 110 IPR023271 -
Dod04g1248 120 ProSitePatterns MIP family signature. 35 43 IPR022357 -
Dod04g1248 120 PRINTS Major intrinsic protein family signature 17 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod04g1248 120 PRINTS Major intrinsic protein family signature 54 73 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod04g1248 120 PANTHER AQUAPORIN NIP2-1 11 97 IPR034294 -
Dod04g1248 120 Pfam Major intrinsic protein 9 82 IPR000425 GO:0015267|GO:0016020|GO:0055085
Dod04g1248 120 PANTHER AQUAPORIN NIP4-1-RELATED 11 97 - -
Dod04g1248 120 SUPERFAMILY Aquaporin-like 11 91 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1248 Dod-Chr4 33444956 33447797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1248 12 100 Major Intrinsic Protein MIP AT5G37820 53.933 4.13e-29 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1248 K09874 - egr:104455655 139.043