Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1237 ATGCATTCTAGTTTCGTAGAAGTACCCTCGGAAGTACACAAAGTTGTCCAACCACCCCACAAGAGCACCCTACAGAAGCTCAAGGTCAAGCTCATGGAAACTTTTTTCCCTGATGATCCCATGCGCCAATTGAAGGGACAACCACTCAACAGAAAACTAATACTAGCAGCTCAATATGTTTTCCCTGTCCTTCAATGGCTCCCTAATTACAGTCTCAGCCTTTTTAAATCTGACCTTCTTTCTGGTCTCACCATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAACCTTGCAAGTCTACCTCCAATTTTGGGACTTTATTCTAGTTTTGTTCCCCCACTAGTGTATGCTGTTCTTGGAAGCTCAATGGACCTTGCAGTTGGACCCGTTTCTATAGCCTCTCTTGTGCTGGGAGCCATGCTCATGGAGGAAGTGTCTCCCACAGCAGAACCTTATCTGTTTGTACAGCTAGCTTTTACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTGCTCTTGGAATTCTAAGGCTAGGATTTATCATTGATTTTCTATCCAAGGCCATACTTATGGGGTTCATGGGTGGAGCAGCTGTGATTGTGTCTCTGCAGCAGCTCAAGAACCTCCTTGGAATCAAACATTTCACTAAACAGATGGCTATCATTCCTGTTATGACTTCTGTTTTTCGCAGTACACACGAGAGCATGAGATATCCAAAATATTTCTGGATCTCAGCTGGAGCTCCTCTTGTATGTGTCACAATCTCTACCCTCCTACTTTTTGCACTAAAGGATAAACATCATGACATCAGTGTTATTGGGAAGCTCCAACAAGGAGTAAATCCTCCTTCAGCCAAGCTGTTTCTCTTCCATGGAAGACATATAGGTCTAGTCATGAAAACTGGGCTCATGACTGGCATTTTATCTCTCACTGAAGGAATTGCTGTTGGAAGGACATTTGCAAGTATCAGAAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTAGTTGGCTCCACGACATCCTGCTTTGTTACATCAGGATCTTTCTCTCGCTCAGCTGTGAACCATAACGCAGGAGGAAAAACAGCGATGTCAAACGTAGTAATGTCGGTGACAGTCTTGGTGACACTCCTGTTTCTTATGCCATTATTTGAATACACACCAAATGTTGTGCTAGGGGCAATCATAATAACAGCTGCAATTGGCCTTTTTGATATCCATGCTGCTTACCTTATATGGAAGATAGACAAATTCGATTTCATTGTGATGTTGACTGCATTCTTCGGTGTCATTTTTATCTCTGTTCAGTACGGCCTAGCTGTTGCAGTTGGGTTGTCAATTTTGAGGATCCTACTGCAAATTACAAGGCCTAAAACAGTAATCTTGGGGAACATACCAGGGACAAAAATGTATCGGAATCTTCATCATTATAAGGAGGCTGCAAGAATACCTGGTTTTCTAATTTTAAGCGTAGAGGCTCCCATCAATTTTGCAAACATCACGTATCTCAATGAGAGGATTTTAAGATTCATAGACGAAGAACAAGAAGATAACAAGAAGGAAAACTCATGCCTTCGATTTGTGATCCTGGAAATGTCAGCTGTGAGCAGCATAGACACAAGCGGAGTCTCACTTTTTCAGGAGTTGAAAACAGCATTGGATAAGAAGAGCATCGAGCTTGCGTTGGTGAATCCTCTAGCTGAGGTCATAGAAAAGTTGATAAGAGCAGATGAAACTAACAGTTTCATCCGAGCAGAATACCTTTTCTTATCGGTTGGAGAGGCTGTAGGAAAACTTTCATCGGCAATGAAGGACCAATCATCAACCAAGGAAGAAGATCCACAAACAATTGTGATTTGTGACTGA 1890 0.4233 MHSSFVEVPSEVHKVVQPPHKSTLQKLKVKLMETFFPDDPMRQLKGQPLNRKLILAAQYVFPVLQWLPNYSLSLFKSDLLSGLTIASLAIPQGISYANLASLPPILGLYSSFVPPLVYAVLGSSMDLAVGPVSIASLVLGAMLMEEVSPTAEPYLFVQLAFTSTFFAGLFQAALGILRLGFIIDFLSKAILMGFMGGAAVIVSLQQLKNLLGIKHFTKQMAIIPVMTSVFRSTHESMRYPKYFWISAGAPLVCVTISTLLLFALKDKHHDISVIGKLQQGVNPPSAKLFLFHGRHIGLVMKTGLMTGILSLTEGIAVGRTFASIRNYKVDGNKEMMAIGFMNVVGSTTSCFVTSGSFSRSAVNHNAGGKTAMSNVVMSVTVLVTLLFLMPLFEYTPNVVLGAIIITAAIGLFDIHAAYLIWKIDKFDFIVMLTAFFGVIFISVQYGLAVAVGLSILRILLQITRPKTVILGNIPGTKMYRNLHHYKEAARIPGFLILSVEAPINFANITYLNERILRFIDEEQEDNKKENSCLRFVILEMSAVSSIDTSGVSLFQELKTALDKKSIELALVNPLAEVIEKLIRADETNSFIRAEYLFLSVGEAVGKLSSAMKDQSSTKEEDPQTIVICD* 630
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1237 629 CDD STAS_SulP_like_sulfate_transporter 485 585 - -
Dod04g1237 629 PANTHER BNAA09G30120D PROTEIN 233 608 IPR030313 -
Dod04g1237 629 Pfam STAS domain 485 603 IPR002645 -
Dod04g1237 629 Pfam Sulfate permease family 75 235 IPR011547 GO:0016021
Dod04g1237 629 Pfam Sulfate permease family 238 433 IPR011547 GO:0016021
Dod04g1237 629 SUPERFAMILY SpoIIaa-like 490 607 IPR036513 -
Dod04g1237 629 Gene3D STAS domain 464 609 IPR036513 -
Dod04g1237 629 ProSiteProfiles STAS domain profile. 484 607 IPR002645 -
Dod04g1237 629 PANTHER BNAA09G30120D PROTEIN 11 235 IPR030313 -
Dod04g1237 629 PANTHER SULFATE TRANSPORTER 233 608 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g1237 629 PANTHER SULFATE TRANSPORTER 11 235 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1237 Dod-Chr4 33249475 33258490 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1237 7 612 Inorganic Solute Cotransporters AT3G15990 59.618 0.0 754
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1237 K17471 - gmx:100787284 919.457