Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1233 ATGGAACATAACAACGCCAGCACCATGCATTCTCATTGCGTGGAAATATCCATGGAAGTACACCAAGTTGTCCCGCCACCCCACAAGAGCACCCTACAGAAGCTCAAGGCCAGGCTCAAGGAAACTTTCTTCCCTGATGATCCCTTGCGCCAATTCAAGGGACAACCACTCAGCAGGAAACTAGTCCTTGGAGCTCAGTATTTGTTCCCTGTTCTTCAATGGGGTCCTAACTACAGCTTCAAGCTCTTCAAATCTGACCTTGTTTCTGGCCTCACTATTGCTAGCTTGGCCATCCCTCAGGGAATCAGTTATGCTAAGCTTGCAAGTCTTCCTCCAATTGTGGGACTATATTCTAGTTTTGTTCCCCCACTTGTTTATGCTGTACTTGGAAGCTCAAGGGACCTAGCAGTAGGACCCGTTTCTATTGCTTCTCTTGTGCTGGGATCCATGCTCAGGCAGGAAGTGTCTCCCACAGCAGACCCGGTTCTGTTTCTTCAGCTAGCTTTCACTTCAACATTCTTTGCTGGTCTCTTTCAAGCTTCTCTTGGGATTCTAAGGCTTGGATTTATCATTGATTTTCTATCTAAGGCCATACTTATTGGTTTCATGGCTGGAGCTGCTGTAATTGTTTCTCTGCAGCAGCTTAAGAGCCTCCTTGGGATCACACATTTCACCACACAGATGGGCCTTGTTCCTGTCATGAGTTCAGTTTTTCATAATGTGCATGAGTGGTCATGGCAAACAATACTGACGGGAATTTGCTTCCTGGTGCTACTACTACTGGCAAGACACGTCAGCATGAGGAAACCAAAACTTTTCTGGGTCTCAGCTGGAGCTCCTCTTGTGTCTGTCATCATATCTACTCTGTTGGCTTTTGCAATTAAGGGTCAAAATCATGGCATCAGTGTAATTGGTAAACTGCAACAAGGAATAAATCCTCCTTCTTGGAATATGTTGCGCTTTCATGAAAGTCACCTAGGCCTTGTCATGAAAACTGGGCTTATCACAGGCATTTTATCCCTCACTGAAGGTATTGCAGTTGGAAGAACATTTGCAGCTCTCAGGAACTACAAAGTGGATGGAAATAAGGAAATGATGGCAATCGGGTTCATGAATGTGGTTGGCTCCTTCACTTCCTGCTATGTTACAACAGGTTCTTTTTCTCGCTCAGCTGTTAACAATAACGCGGGTGCAAAAACAGCTGTGTCAAATGTAGTAATGTCAGTGACAGTCATGGTGACACTCCTTTTTCTTATGCCATTGTTCCAATATACGCCTAATGTTGTTTTGGGTGCAATCATAGTCACAGCAGTGATTGGCCTCATTGATATCCCTGCTGCTTGCCTCATTTGGAGGATCGACAAATTCGATTTCATTGTCATGTTGACTGCATTCTTTGGTGTTATTTTCATCTCTGTAGAGCAAGGCCTTGCTTTAGCAGTTGGGTTATCAACCTTTAAGATGCTCCTACAAATCACAAGGCCTAAGACAGTAATGTTAGGGAAGATACCAGGGACAGACATATATAGAAATCTTCATCAATATAAGGATGCTGTAAGAGTACCTGGTTTTCTCATTTTAAGCATTGAGGCTCCCATCAATTTTGCTAACATCACATATCTCAACGAAAGGACATTACGATGGATTGAAGAAGACGAAGACAATATAAAGGAACAATCAAGCCTTCGATTTTTTATCCTGGAAATGTCAGGTATACACAGTAAAGTTGGAATTTCATGTTGTCTTGATTTCTTATGA 1758 0.4317 MEHNNASTMHSHCVEISMEVHQVVPPPHKSTLQKLKARLKETFFPDDPLRQFKGQPLSRKLVLGAQYLFPVLQWGPNYSFKLFKSDLVSGLTIASLAIPQGISYAKLASLPPIVGLYSSFVPPLVYAVLGSSRDLAVGPVSIASLVLGSMLRQEVSPTADPVLFLQLAFTSTFFAGLFQASLGILRLGFIIDFLSKAILIGFMAGAAVIVSLQQLKSLLGITHFTTQMGLVPVMSSVFHNVHEWSWQTILTGICFLVLLLLARHVSMRKPKLFWVSAGAPLVSVIISTLLAFAIKGQNHGISVIGKLQQGINPPSWNMLRFHESHLGLVMKTGLITGILSLTEGIAVGRTFAALRNYKVDGNKEMMAIGFMNVVGSFTSCYVTTGSFSRSAVNNNAGAKTAVSNVVMSVTVMVTLLFLMPLFQYTPNVVLGAIIVTAVIGLIDIPAACLIWRIDKFDFIVMLTAFFGVIFISVEQGLALAVGLSTFKMLLQITRPKTVMLGKIPGTDIYRNLHQYKDAVRVPGFLILSIEAPINFANITYLNERTLRWIEEDEDNIKEQSSLRFFILEMSGIHSKVGISCCLDFL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1233 585 PANTHER BNAA09G30120D PROTEIN 19 573 IPR030313 -
Dod04g1233 585 ProSitePatterns SLC26A transporters signature. 112 133 IPR018045 GO:0008271|GO:0008272
Dod04g1233 585 ProSiteProfiles STAS domain profile. 514 572 IPR002645 -
Dod04g1233 585 TIGRFAM sulP: sulfate permease 70 572 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g1233 585 Pfam Sulfate permease family 83 463 IPR011547 GO:0016021
Dod04g1233 585 Gene3D STAS domain 494 575 IPR036513 -
Dod04g1233 585 PANTHER SULFATE TRANSPORTER 19 573 IPR001902 GO:0015301|GO:0016020|GO:0055085
Dod04g1233 585 Pfam STAS domain 515 573 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1233 Dod-Chr4 33226064 33233370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1233 3 574 Inorganic Solute Cotransporters AT3G15990 66.376 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1233 K17471 - gmx:100787284 1015.76