Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1232 ATGGCAAAGCGATTGATTCCAACCCTCAACCGCGTCCTCATCGAGAAGATTGTCCCTCCTTCCAAGACCACCTCTGGCATCCTTCTCCCCGAAAAGATCCCCCAGCTTAATTCAGGTAAGGTGATAGCAGTTGGACCCGGAGCACGTGACAAAGCAGGGAATTTGATTCCCGTTGCCGTCAAGGAGGGTGACACCGTGCTCTTGCCCGAGTACGGTGGCTCCCAAATCAAGCTGGATGACAAAGAGTATGCTCTATGTCTTGGAATCGTGTTCTATTTCAATTTTTGTTTTGGATGTATTTGCGAAGTGAAGCCTTTTTGA 321 0.4891 MAKRLIPTLNRVLIEKIVPPSKTTSGILLPEKIPQLNSGKVIAVGPGARDKAGNLIPVAVKEGDTVLLPEYGGSQIKLDDKEYALCLGIVFYFNFCFGCICEVKPF* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1232 106 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 SUPERFAMILY GroES-like 4 85 IPR011032 -
Dod04g1232 106 ProSitePatterns Chaperonins cpn10 signature. 5 29 IPR018369 GO:0005524|GO:0006457
Dod04g1232 106 Gene3D GroES chaperonin 1 87 IPR037124 GO:0006457
Dod04g1232 106 SMART Cpn10_2 4 90 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 CDD cpn10 4 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 Pfam Chaperonin 10 Kd subunit 5 86 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 85 IPR020818 GO:0005524|GO:0006457|GO:0140662
Dod04g1232 106 PANTHER GROES-LIKE FAMILY PROTEIN 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1232 Dod-Chr4 33205661 33206603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1232 3 87 Calmodulin-binding Proteins AT5G20720 39.535 9.07e-10 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1232 K04078 - vvi:100264459 149.828