Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1228 ATGTCTGATTCATTCAGTACCTTCCACTCTGCCACTCCAAACTCCTCCCTTAATTCCCTTTTAGCTCCCAAACTCACTACAATCCCCTCAATAGCCCAACCTTACTGCAGTATTTGCACCCACTGCAACCATATCCTCAGCTTCAATCACCATGCTGGTCATGTGGCAGAGGAAGGGACAAGTAAAGCAGGGTTGCATGTGCAGTCCCAGCAAAGCACAAGGTGGAGTCCAACGCCAATCCAGTTACTAGTCCTTGAGGAATTGTACAGGCAAGGTACCAAGACCCCATCAGCTGAACAAATCCAGCAAATAGCCTCACAGCTGCGCCAATTTGGCAAGATTGAAGGCAAGAACGTCTTCTACTGGTTCCAGAACCACAAGGCAAGGGAGCGCCAGAAGCGTCGCCGCCTTGAGATTGAGGAAACTGGTTCTTCCACTCGAGGGTTGAAAGAGACAGGTTCTGAAGTTAAAGAGACAAAGAAGTGGGTATCCACTTCGAACTGCAGTGGACATGCAGAGGAATCGGCTACACTGGATATAGCAGAAAAGGGTTCAAATGGGTGGCCTCAACTTGAGGGAAAAGGCATACAAGCTTTGAGGAAAAACCTCGCATCAGAAAGGCAAGCTAAGTGCCAAAATATGGAGATGGTTCCCTTCCCTCCAATTACCATGGCATCTCCAACTTCAGTAGCATCACACAGAACACCAAACTTACAACTTTTGAGCACCCCTCAGAATTATATTTTACCATTTGTACTCAACAGAGAAAGTTTCAATCATCATGATGAAGAAAATGCAGATCCTCGGACCCTAGAACTATTTCCAGTTAAGAGGGATGGCCAAGATGGCATTTGTCTCTCCGAGAGGAAATCTAATAAGTTCTGTGCCAAGGCTTCGATGGAAGAAATCAGCTGCAGCCAGTTTTTTGAGTTTCTTCCTTTAAGGAACTGA 951 0.4627 MSDSFSTFHSATPNSSLNSLLAPKLTTIPSIAQPYCSICTHCNHILSFNHHAGHVAEEGTSKAGLHVQSQQSTRWSPTPIQLLVLEELYRQGTKTPSAEQIQQIASQLRQFGKIEGKNVFYWFQNHKARERQKRRRLEIEETGSSTRGLKETGSEVKETKKWVSTSNCSGHAEESATLDIAEKGSNGWPQLEGKGIQALRKNLASERQAKCQNMEMVPFPPITMASPTSVASHRTPNLQLLSTPQNYILPFVLNRESFNHHDEENADPRTLELFPVKRDGQDGICLSERKSNKFCAKASMEEISCSQFFEFLPLRN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1228 316 ProSiteProfiles 'Homeobox' domain profile. 68 133 IPR001356 GO:0003677
Dod04g1228 316 SUPERFAMILY Homeodomain-like 68 136 IPR009057 -
Dod04g1228 316 CDD homeodomain 73 134 IPR001356 GO:0003677
Dod04g1228 316 Gene3D - 66 133 - -
Dod04g1228 316 MobiDBLite consensus disorder prediction 134 168 - -
Dod04g1228 316 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 36 316 - -
Dod04g1228 316 SMART HOX_1 70 137 IPR001356 GO:0003677
Dod04g1228 316 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 36 316 IPR044555 GO:0003700|GO:0099402
Dod04g1228 316 MobiDBLite consensus disorder prediction 134 158 - -
Dod04g1228 316 Pfam Homeodomain 72 132 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1228 Dod-Chr4 33144006 33146604 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1228 2 316 Wox Gene Family AT3G18010 31.865 1.31e-38 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Dod04g1228 Homeodomain 5.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1228 - - gmx:100788830 427.172