Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1222 ATGGAAAACATTCTGGGTCTTATGAAACTTGGCATCAAAAGAGGCACTAATCTTGCACCTCGCGATAGTCGGAGTCGTAGCAGTGACCCTTATGTCCTTGTCACCATGGCCGAACAGAAACTGAAGACTGGTGTAGTGAAACACAACTGCAATCCTGAGTGGAATGAAGAATTGACACTTTGTGTTAGGGATGTTAACATTCCCATACATTTGACAGTTTTTGACAAGGACACTTTCACTGTGGACGACAAAATGGGCGAAGCAGACATAGACATAAAACCATATCTTCAGTGTGTTAAGTTGGGCCCGAGCGACCTCCCAGATGGCCATGTGGTCAAGATTGTTCAACCAAATAGTTTTAACTGCCTTGCTGAAGAGAGCAGGTGCATATGGAAAAATGGGAAAATCATACAGGAGATGTGTTTAAGATTGAGAAATGTCGCCTCTGGTGATGTATACGTGGAAATTGAGTGGGTTGATGTTCCAGATTCCAAGGGCTTATCAGGGGTTGAGTTTTAG 519 0.4355 MENILGLMKLGIKRGTNLAPRDSRSRSSDPYVLVTMAEQKLKTGVVKHNCNPEWNEELTLCVRDVNIPIHLTVFDKDTFTVDDKMGEADIDIKPYLQCVKLGPSDLPDGHVVKIVQPNSFNCLAEESRCIWKNGKIIQEMCLRLRNVASGDVYVEIEWVDVPDSKGLSGVEF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1222 172 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 101 IPR035892 -
Dod04g1222 172 SMART C2_3c 7 104 IPR000008 -
Dod04g1222 172 Gene3D C2 domain 5 167 IPR035892 -
Dod04g1222 172 ProSiteProfiles C2 domain profile. 1 108 IPR000008 -
Dod04g1222 172 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 172 - -
Dod04g1222 172 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 1 172 IPR044562 -
Dod04g1222 172 Pfam C2 domain 8 94 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1222 Dod-Chr4 33064181 33066052 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1222 40 168 C2H2 Transcription Factor Family AT1G70790 55.725 6.09e-48 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1222 - - gmx:100781585 263.848