Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1195 ATGGAAGGCAGCAATGGTGGCGGGAGTGGGAAGAAGGGAGAGGAGATCGTGGACGTTGGATCTGTTGTTGAAGCCGTTTCCGCCGACCACGGCGACGCCCCTCTCTACCACATCGAAAGTCTCTGCATGCGTTGCGGTGAAAACGGGATCACGAGATTTTTGCTCACCTTAATTCCTCACTTCAGAAAGATTTTGCTGTCTGCTTTTGAATGTCCTCACTGTGGTGAGAGGAACAATGAAGTGCAGTTTGCTGGTGAAATTCAACCGCGTGGATGCTGTTACATTCTGCAGCTCCCATCTGGCAATCACGAGATGCTCAACCGAGAAGTAGTGAAATCAGAATCTGCTACAATTAAGATTCCAGAATTGGATTTTGAGATTCCACCAGAGGCTCAGCGTGGTAGTCTGTCAACGGTGGAAGGTATACTAATGCGAGCTGCTGATGAGCTTCAGGCCCTTCAAGAGGAACGCAAGAAAGTGGCTCCAGAGACGGCTGAAGCAATCGATCAGTTCTTGGTGAAATTGCGAGCCTGTGCAACCGGAGAATCCCCCTTCACGTTTATTCTTGATGATCCTGCTGGAAACAGCTTCATTGAAAACCCGTTTGCACCATCATCTGATCCATCATTGACCATCAAGTTTTATGAGCGAACACCTGAGCAACAAGCATTATTGGGGTACCTTGTTGATTCTACACAGATTGAAGGAACTCGTGATGAAGCACAAGCAGGGGGAGATGTGGGGGATGCTGATCAAGTGAGGAGAGAACCACATGGGTCAATAGGGGCAGCAGCTGGTCATCGAGCCATTGCACAGAGTAATAGTGCAGAAATTGCAGAGGCCTTATTTCGATATACTGCGCCAGAAGAGGTGATGACTTTCCCATCAACTTGTGGTGCTTGTGCCACTAGGTGCGAAACTCGAATGTTTGTCACCAATATTCCATACTTTCAAGAAGTAATTGTAATGGCATCCACATGTGATTTGTGTGGTTACCGCAACTCCGAGTTGAAACCAGGTGGACGAATTCCCGACAAAGGAAAAAGGATTTCCCTTCGCGTCAAAAATGTTAATGACCTAAGTCGTGATGTAATCAAGTCCGATACGGCAAGTGTAAAAGTTCCTGAACTTGACTTGGAGTTGGCAAGTGGCACCCTGGGAGGAGTGGTTACAACTGTTGAAGGTTTAATTACAAAAATTAGTGAAAGCCTTCAGAGGGTCCATGGGTTTACTTTTGGAGATAGTCTTGATGAAAATAGAAAGAGCAAATGGCTAGATTTTAAAGAAAGGCTTAACAAGCTTCTTAGCTTGGAAGAAGCTTGGACTTTGATTCTTGATGATGCATTAGCCAACTCCTTTATAGCACCTGCAACTGATGATATAAAAGACGACAATCAATTAGCATTTGAGGAATATGAGAGGTCATGGGAGCAAAATGAAGAATTAGGACTGAATGATATGGACACCGCTTCTGCCGATGTTGCTTATGAATCAACAAATACTAGTAGAAATGAATGA 1518 0.4513 MEGSNGGGSGKKGEEIVDVGSVVEAVSADHGDAPLYHIESLCMRCGENGITRFLLTLIPHFRKILLSAFECPHCGERNNEVQFAGEIQPRGCCYILQLPSGNHEMLNREVVKSESATIKIPELDFEIPPEAQRGSLSTVEGILMRAADELQALQEERKKVAPETAEAIDQFLVKLRACATGESPFTFILDDPAGNSFIENPFAPSSDPSLTIKFYERTPEQQALLGYLVDSTQIEGTRDEAQAGGDVGDADQVRREPHGSIGAAAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACATRCETRMFVTNIPYFQEVIVMASTCDLCGYRNSELKPGGRIPDKGKRISLRVKNVNDLSRDVIKSDTASVKVPELDLELASGTLGGVVTTVEGLITKISESLQRVHGFTFGDSLDENRKSKWLDFKERLNKLLSLEEAWTLILDDALANSFIAPATDDIKDDNQLAFEEYERSWEQNEELGLNDMDTASADVAYESTNTSRNE* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1195 505 PANTHER ZINC FINGER PROTEIN ZPR1-RELATED 11 498 - -
Dod04g1195 505 Pfam ZPR1 zinc-finger domain 40 199 IPR004457 GO:0008270
Dod04g1195 505 Pfam ZPR1 zinc-finger domain 296 454 IPR004457 GO:0008270
Dod04g1195 505 MobiDBLite consensus disorder prediction 481 505 - -
Dod04g1195 505 SMART zpr1 296 456 IPR004457 GO:0008270
Dod04g1195 505 SMART zpr1 40 200 IPR004457 GO:0008270
Dod04g1195 505 Coils Coil 136 156 - -
Dod04g1195 505 Gene3D ZPR1, A/B domain 342 484 IPR042451 -
Dod04g1195 505 Gene3D ZPR1, A/B domain 86 227 IPR042451 -
Dod04g1195 505 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 42 223 IPR004457 GO:0008270
Dod04g1195 505 TIGRFAM ZPR1_znf: ZPR1 zinc finger domain 297 488 IPR004457 GO:0008270
Dod04g1195 505 Gene3D ZPR1, zinc finger domain 29 85 IPR042452 -
Dod04g1195 505 Gene3D ZPR1, zinc finger domain 286 341 IPR042452 -
Dod04g1195 505 PANTHER ZINC FINGER PROTEIN ZPR1 11 498 IPR040141 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1195 12 503 C2H2 Transcription Factor Family AT5G22480 75.101 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1195 K06874 - gmx:100798741 868.611