Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1184 ATGGAGAGAGGCGGTTACAATCCAAGGAACAGAGGCGGAGGCCGCGGTGGTGGTTACCCCAGAGGAGGCGGTGGAGGAAGAGGGCCTCATCGCCCACCACCGCAGCAACCCGTTGAAGGTGGCAGACGCGGTGGCGGCGGCGGCGGCAGAGGCGGAGGCCGAGGGTTTCACCAGCCACGAGAACAGTGGCAACAAAGGCCAAGTGGAAGCGGAAGCTCTTCCTCAAGTCCTATTTCCCCTCCCCCAAATCCTCCCCTTCAGTCTCAACAAGTTGTTCATCTTTCCAATGTGGAAAGAACCGAACCATCGGATTCGGAGCAGAAGATCTCTCCAGTCCGCAGGCCGGACGGTGGTGGCACCATGTCGATTCTGACCAAGAGGCTGCGAGTGAACCACTTCCCTGTGAAGTTCAACCGGAATGCTATAATCCTCCACTACGACGTTGATGTGAAGCCCACTGCGCCCCAGAGGCCAGGTCGCCCTCCGAAGAAGATATCAAAGTCCGATCTGTCCATGATCCGGGAGAAGCTCTTCAATGATCATCCCCAGAGGCTTCCTCTAGGGATGACCGCCTACGACGGCGAGAAGAGCATCTTCAGCAGGGTGGAATTACCGGAAGAGTCATTCTCTGTTGACGTCTACAAAGCAGAGGATGAAAGGCCCACTACCTATTTGGTCACTCTGACGCTGGTGAACAGGCTCGAGTTGAGCAAGTTAGACGATTACATCAGAGGCAGAGCACTCTCCATCCCTAGGGTTATCTTACAAGGTGTGGATGTGGTCTTCAAGGAGAATCCCGTGAGACGCAACGTTTCGGTTGGAAGGTGCTTCTACCCAATGAATCCGCCGTTGGTGCAGGATGATCTACACCAGGGGATAATTGCGGTGGGAGGGTTTCAGCACAGTCTGAAGCCTACCCGTCAGGGACTGTCTCTGTGCCTTGATTACTCCGTTCTGTCCTTCAGGAAGAGATTGCCGGTCTTGGATTTCCTTCACGAGCATATCAGAGGCTTCAATTTGCGTGAATTTGGGAGATTCAGGAGATGGGTTGAGGAAGCGCTTGTTGGGTTGAAAGTTAACGTCACCCACAGGAGAACAAAACAGAAGTACACCATTGCCAAGCTGACTCCTAGGCCAGCACGGCTTACCACTTTCCCTGTTGGGGATCCCCCAGAGGATGTTTATCTTCTTGATTACTTCCGGGATAGGTATGGCGTCAACACCGTGTACAATGACATTCCTGCGTTGGAATTTGCGGGCAGGATGAACTACGTGCCTATGGAACTGTGTGTCTTGGCTGAGGGTCAGAGGTACCCTAAAGATTATTTGGGCAGGGACGCTGCCAGGAGGCTGAAAGACATGTCGTTGCCTCCTCCTAGGATGAGGCAAGCTTCGATACAGCAGATGGTGAATGCTGGCGATGGACCCTGCGGTGGTGGAATTATTGAAAATTTTGGAATGACTGTCAACACTTCTATGACAACCGTGACAGGACGTGTTATTGGACCCCCAGAGTTGAGGCTAGGTGATCCCAGTGGAAGGACTATTAGTATGACGCTGGATCCAAACAAGTGCGACTGGAATCTAGTTGGAAGATCAATGGTGGAAGGCAAGCCAGTTGAGTGTTGGGGCATTCTTGATTTTACTGTCAACAGTGACCGCATGTTTAATGCTCAGGCATTCAGTCGTAAGCTTATTGAGAAGTACAGAAACATGGGCATTGACATGAGCTCTCCAGTTTGGCTTGAAAAAACAGAAATGTGGAAACTTGGGAATTTTAATTCACTTTGTGAATTACTAGAGAAAATTAATGAAGGGGTTCGTAGAAAATGTCGACGCCGTCTTCAGTTTCTTCTTTGTGTGATGGTCAACAAAGATCCAGGATACAAGTGGCTCAAGTGGATCTCTGAGACCAAGATTGGCATAGTGACACAGTGCTGCTTGTCTGGCAATACTGATTTTGTCAAAGACCAATATCTTACAAATCTTTCTCTAAAGATCAATGCTAAAATGGGAGGCAGTAACGTGGAACTTGTTAATAGACTCCCGCACTTCGAGGGTGATGGTCATGTTATGTTTATAGGGGCTGATGTCAATCATCCAGGTTCCAGGGACGCCAGTAGCCCATCAATTGCCGCTGTGGTTGGCACTGTTAACTGGCCTGGTGCAAATCGCTATGCAGCTCGTGTTTGTGCTCAAGGCAATCGGATCGAGAAAATTTTGAACTTTGGAGAAGTTTGCCTTGAGCTTGTTGGATGTTATGAAAGGTTGAACAAAGTCAGACCCGAAAAGATTGTTATCTTTCGGGACGGGGTCAGTGAGAGTCAATTTCAAATGGTACTTGGTGAGGAGCTACAAGATTTGAAGAGAGTATTTCAGGGCTCAAATTACTTCCCAACCATCACTCTTATTGTTGCACAAAAGCGACACCAGACTCGACTGTTCCCCGCAGCTCAGAGTGAGGGGACTCGTAGTGGCAACGTATTACCTGGAACAGTGGTGGACACAGTTATCATACACCCTTTTGAATTTGACTTTTATCTCGTTAGTCACTATGGAAGCCTAGGTACAAGCAAGCCGACTCATTATCACGTGCTGTGGGATGAGCACAATTTTACGTCGGACAAATTGCAGAAACTAATTTATGATATGTGCTTTACCTTTGCAAGGTGTACTAAACCTGTGTCTCTAGTTCCTCCGGTGTACTATGCTGACCTTACTGCGTATAGAGGACGCTTATACCATGAAGCAAGGAGTGGCGTGCAATCTCCATATTCTGGTGCATCTTCCTCATCATCACCGATGGCTTCTTCATCTTCTTCAACAATCTCGTATTCAAATGATCCAGATTGTTACAAGTTGCATGCTGATCTGGAGAACGTAATGTTCTTCATCTAA 2898 0.4872 MERGGYNPRNRGGGRGGGYPRGGGGGRGPHRPPPQQPVEGGRRGGGGGGRGGGRGFHQPREQWQQRPSGSGSSSSSPISPPPNPPLQSQQVVHLSNVERTEPSDSEQKISPVRRPDGGGTMSILTKRLRVNHFPVKFNRNAIILHYDVDVKPTAPQRPGRPPKKISKSDLSMIREKLFNDHPQRLPLGMTAYDGEKSIFSRVELPEESFSVDVYKAEDERPTTYLVTLTLVNRLELSKLDDYIRGRALSIPRVILQGVDVVFKENPVRRNVSVGRCFYPMNPPLVQDDLHQGIIAVGGFQHSLKPTRQGLSLCLDYSVLSFRKRLPVLDFLHEHIRGFNLREFGRFRRWVEEALVGLKVNVTHRRTKQKYTIAKLTPRPARLTTFPVGDPPEDVYLLDYFRDRYGVNTVYNDIPALEFAGRMNYVPMELCVLAEGQRYPKDYLGRDAARRLKDMSLPPPRMRQASIQQMVNAGDGPCGGGIIENFGMTVNTSMTTVTGRVIGPPELRLGDPSGRTISMTLDPNKCDWNLVGRSMVEGKPVECWGILDFTVNSDRMFNAQAFSRKLIEKYRNMGIDMSSPVWLEKTEMWKLGNFNSLCELLEKINEGVRRKCRRRLQFLLCVMVNKDPGYKWLKWISETKIGIVTQCCLSGNTDFVKDQYLTNLSLKINAKMGGSNVELVNRLPHFEGDGHVMFIGADVNHPGSRDASSPSIAAVVGTVNWPGANRYAARVCAQGNRIEKILNFGEVCLELVGCYERLNKVRPEKIVIFRDGVSESQFQMVLGEELQDLKRVFQGSNYFPTITLIVAQKRHQTRLFPAAQSEGTRSGNVLPGTVVDTVIIHPFEFDFYLVSHYGSLGTSKPTHYHVLWDEHNFTSDKLQKLIYDMCFTFARCTKPVSLVPPVYYADLTAYRGRLYHEARSGVQSPYSGASSSSSPMASSSSSTISYSNDPDCYKLHADLENVMFFI* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1184 965 Gene3D paz domain 320 438 - -
Dod04g1184 965 SUPERFAMILY Ribonuclease H-like 607 916 IPR012337 -
Dod04g1184 965 MobiDBLite consensus disorder prediction 1 121 - -
Dod04g1184 965 Pfam Piwi domain 619 912 IPR003165 GO:0003676
Dod04g1184 965 SMART PAZ_2_a_3 329 456 IPR003100 GO:0005515
Dod04g1184 965 Pfam Argonaute linker 1 domain 272 323 IPR014811 -
Dod04g1184 965 MobiDBLite consensus disorder prediction 61 76 - -
Dod04g1184 965 SUPERFAMILY PAZ domain 321 472 IPR036085 GO:0005515
Dod04g1184 965 Gene3D - 687 965 IPR036397 GO:0003676
Dod04g1184 965 ProSiteProfiles Piwi domain profile. 617 916 IPR003165 GO:0003676
Dod04g1184 965 SMART DUF1785_2 271 324 IPR014811 -
Dod04g1184 965 Gene3D - 500 680 - -
Dod04g1184 965 ProSiteProfiles PAZ domain profile. 325 434 IPR003100 GO:0005515
Dod04g1184 965 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 94 964 - -
Dod04g1184 965 Pfam PAZ domain 344 444 IPR003100 GO:0005515
Dod04g1184 965 CDD Piwi_ago-like 481 914 IPR045246 -
Dod04g1184 965 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 94 964 - -
Dod04g1184 965 CDD PAZ_argonaute_like 326 433 - -
Dod04g1184 965 Pfam N-terminal domain of argonaute 127 261 IPR032474 -
Dod04g1184 965 SMART Piwi_a_2 617 915 IPR003165 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1184 Dod-Chr4 32597123 32601534 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1184 70 940 Eukaryotic Initiation Factors Gene Family AT1G48410 34.375 2.37e-141 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1184 K11593 - gmx:100805250 1216.45