Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1155 ATGATGGCTCTTTTGGTATATTTCCTGCTTTTCGTGGCCCTCACTGGCCATTCAAGTGCTCTTTACTGTGTATGTAAAGATGGGGTAGGTGATCAAGTCCTTCAGAAAGCAATAGATTATGCTTGTGGAAATGGAGCTGACTGTACTCCTATTCTCCAAAACGGAGCTTGTTACCAACCCAACACTGTGAAGGATCACTGCAACTATGCCGTCAATAGCTATTACCAGAGAAAGGGCAATGTTCAAGGGAGCTGTGATTTTGCTGGTGCTGCTACCACTAGTCCAAACCCACCTTCTACATCATCTGGATGTGTCTTCCCCTCAAGTCCTAGCAATGCTGGAACAGGCTCTACAACCCCACCAACAGATACACCAGGAATATCACCTACAGTACCATCAACAGGTACAGGTACAGGCACAGGCAATGGCACTGGCAGTCCTAGTGTGTTTGGACTAAGTCCAACATCTACAACTGGTGGTGGCAGCTTCAACAATGGAGCTGTATTGGCTCATTTGGAAAGCACCAAAACCAAGTTGCTATTGCCCCTTGTTCTTACCATATGGTTGGCATTGAGGGTCTAA 582 0.4639 MMALLVYFLLFVALTGHSSALYCVCKDGVGDQVLQKAIDYACGNGADCTPILQNGACYQPNTVKDHCNYAVNSYYQRKGNVQGSCDFAGAATTSPNPPSTSSGCVFPSSPSNAGTGSTTPPTDTPGISPTVPSTGTGTGTGNGTGSPSVFGLSPTSTTGGGSFNNGAVLAHLESTKTKLLLPLVLTIWLALRV* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1155 193 MobiDBLite consensus disorder prediction 98 157 - -
Dod04g1155 193 PANTHER CARBOHYDRATE-BINDING X8 DOMAIN PROTEIN 2 171 - -
Dod04g1155 193 Gene3D - 16 113 - -
Dod04g1155 193 Pfam X8 domain 22 92 IPR012946 -
Dod04g1155 193 SMART X8_cls 21 106 IPR012946 -
Dod04g1155 193 PANTHER BETA-1,3 GLUCANASE 2 171 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1155 Dod-Chr4 32208900 32211727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1155 22 99 Glycoside Hydrolase AT2G01630 45.570 1.87e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1155 - - gmx:100789955 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1155 04 32208900 32211727 Dod04g1155 04 32208900 32211727 ECH
Dod04g1155 04 32208900 32211727 Dod02g1741 02 21901832 21903735 PCT