Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1154 ATGTCCACCGAGAAGGAGAGAGAGACCCAGGTTTACCTGGCCAAGCTTGCTGAGCAGGCTGAGAGATATGAAGAAATGGTTGAATGCATGAAAGCAGTAGCCAAACTTGATCTAGAGCTAACTGTGGAAGAGAGGAACCTCCTCTCTGTGGGATACAAAAATGTGATTGGTGCACGGCGAGCCTCTTGGCGCATTATGTCTTCAATTGAACAGAAGGAAGAGTCTAAGGGGAATGAGCACAATGTGAAACTGATCAAGAGTTACTGCCAAAAGGTCGAGGAGGAACTATGTAAAATTTGCAATGACATTCTCACAATTATTGAGCAGCATCTCATTCCTTCTTCCACCTCAGGAGAAGCTACTGTTTTCTACTATAAGATGAAGGGTGACTATTTTCGATATCTTGCTGAGTTCAAGACCGACCAAGAAAGAAAAGAGGCAGCTGAGCAGTCACTCAAGGGATATGAGGCTGCTTCAGCCACAGCAAACACAGATCTTCCATCGACACATCCAATCCGTCTTGGACTTGCACTCAACTTTTCAGTGTTTTATTATGAGATAATGAACTCTCCCGAAGGGTAA 582 0.4433 MSTEKERETQVYLAKLAEQAERYEEMVECMKAVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEESKGNEHNVKLIKSYCQKVEEELCKICNDILTIIEQHLIPSSTSGEATVFYYKMKGDYFRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPEG* 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1154 193 Coils Coil 13 33 - -
Dod04g1154 193 Pfam 14-3-3 protein 13 192 IPR023410 -
Dod04g1154 193 Gene3D - 1 193 IPR036815 -
Dod04g1154 193 PRINTS 14-3-3 protein zeta signature 39 68 IPR000308 -
Dod04g1154 193 PRINTS 14-3-3 protein zeta signature 119 141 IPR000308 -
Dod04g1154 193 PRINTS 14-3-3 protein zeta signature 88 112 IPR000308 -
Dod04g1154 193 PRINTS 14-3-3 protein zeta signature 181 193 IPR000308 -
Dod04g1154 193 PRINTS 14-3-3 protein zeta signature 154 180 IPR000308 -
Dod04g1154 193 SUPERFAMILY 14-3-3 protein 6 192 IPR036815 -
Dod04g1154 193 PANTHER 14-3-3 PROTEIN 3 192 IPR000308 -
Dod04g1154 193 PANTHER BNAC03G57490D PROTEIN 3 192 - -
Dod04g1154 193 SMART 1433_4 7 193 IPR023410 -
Dod04g1154 193 ProSitePatterns 14-3-3 proteins signature 1. 45 55 IPR023409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1154 Dod-Chr4 32197226 32199463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1154 3 192 14-3-3 family AT1G26480 84.211 5.53e-118 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1154 - K06630 jre:108989386 365.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1154 04 32197226 32199463 Dod04g1154 04 32197226 32199463 ECH
Dod04g1154 04 32197226 32199463 Dod02g1733 02 21792929 21796822 PCT