Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1136 ATGAGAGACAAGAAAGCTTTGAAGGAGTTGTTGGCGTTGGACAGGGAGACACTTGAGATGATGTCTCCCAAGCCCTTCAGGCCTCGCTGTTTGGATGTGATAGTGTCTTTGCAAGCACCAAATCTCTACAGCGAAGAAAACTTGGCTGAGATAAAGAATTTCCATCAAGAATTGCTGCAGCAACACTCTTCACAAGATGATGATGCTGACGCTGATGCTGCAGTTGCACCTGAAATGACCGAGGATAACAACAACATGATGGAGACCGCAGAAAGGTCCCCTGAGAGCGATCAAGATTTGGCGGAAGAGGAAGTGGTTATCCACCCAGCAGTGAACAAGAAACCAAGATCAGAGAATAACAAGAGGGTGATCACTGGAAAAAGGAGCCGCCAAAGTGACGAGAGTGTGGTTGAAGAGGAAGTGGTCATCAACAACCCCGTCAGCAAGAAACCAAGAAGCACAACTAGTATTAAGTTAAAGATGAATGCTACTAGTCCATCACCATCAAGTTCATCACCAAGTACTAGCCCATCTTCATCAAATTTGTCACCAGATACCTCTCCATCATCATCAAACCCATCACCAAATACTTCTCCTTCTCCATCAAATTTGTCACCACCACCACCACCACATCACACCACTCCTACTCCTCCATCATCACCAAATCCACCACCAGATAATCCATCATTACCAGCATCACCAAATGCGGCACCACCGGATATGCCTACTGAATTCAAGAACAAGATCCTGGAGTTGAATGGCACAGATATTGTGTTTATCATGCACAAGACACTTTCCGACACGGATGTGAACCCGAACAATGATCGTATGTCAATGCCACTGACACAAATCGCGCGTGAGTTTCTTACTGAAGCCGAGAAGGAAGCATTAGAGGAAAGAGACGACCGCAAGAAAAAATTCCTTATTGGTCTAAAAGTGGCAGTGTTAGACCCGTGCCTCAGAGAGTTTACTTTGAAATTGAAGAAGTGGAAAATGAAGACAACAAGCACGTACAACCTATCTTCTCAATGGAAAAGAATTGTTTCGAGTAACCATCTGAAAAAGAATCAAGAATTGGATATATGGTCTTTTAGGGTCCAAGACAAACTCTACTTCATATTCAATAAACTCTGA 1134 0.4383 MRDKKALKELLALDRETLEMMSPKPFRPRCLDVIVSLQAPNLYSEENLAEIKNFHQELLQQHSSQDDDADADAAVAPEMTEDNNNMMETAERSPESDQDLAEEEVVIHPAVNKKPRSENNKRVITGKRSRQSDESVVEEEVVINNPVSKKPRSTTSIKLKMNATSPSPSSSSPSTSPSSSNLSPDTSPSSSNPSPNTSPSPSNLSPPPPPHHTTPTPPSSPNPPPDNPSLPASPNAAPPDMPTEFKNKILELNGTDIVFIMHKTLSDTDVNPNNDRMSMPLTQIAREFLTEAEKEALEERDDRKKKFLIGLKVAVLDPCLREFTLKLKKWKMKTTSTYNLSSQWKRIVSSNHLKKNQELDIWSFRVQDKLYFIFNKL* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1136 377 SUPERFAMILY DNA-binding pseudobarrel domain 259 375 IPR015300 -
Dod04g1136 377 MobiDBLite consensus disorder prediction 147 198 - -
Dod04g1136 377 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 2 144 IPR005508 GO:0003677
Dod04g1136 377 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 236 374 IPR005508 GO:0003677
Dod04g1136 377 Gene3D - 243 377 IPR015300 -
Dod04g1136 377 PANTHER DUF313 DOMAIN PROTEIN 236 374 - -
Dod04g1136 377 MobiDBLite consensus disorder prediction 199 238 - -
Dod04g1136 377 MobiDBLite consensus disorder prediction 60 243 - -
Dod04g1136 377 CDD B3_DNA 263 356 IPR003340 GO:0003677
Dod04g1136 377 Pfam B3 domain-containing protein At2g31720-like 253 349 IPR005508 GO:0003677
Dod04g1136 377 MobiDBLite consensus disorder prediction 92 137 - -
Dod04g1136 377 PANTHER DUF313 DOMAIN PROTEIN 2 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1136 Dod-Chr4 32002242 32003445 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1136 166 372 B3 DNA Binding Superfamily AT1G05930 25.000 8.31e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1136 - - gmx:102663833 162.54