Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1135 ATGAGAGACAAGGAAGCTTTGAAGGGCTTGTTGGCGTTGGATAGGGAGACACTTGATATGATGTCTTCCAAGCCCTTCGAGCCTCGCTTTTTGGATGTGATAGTGTCTATGGATGCACAACATCTTTATAGCGAAGAAAACTTGGCTGAGATAAGGAATATCCATCAAGAATTGCAGCAGCAACAACAACAACAACAACAGCACTCTTCACAAGATGCTGATGCTGCTGCTGCTGCAGTTATACCTGAAAAGACCGAGGATAACAACATGATGGTGACCGCAGAAAGGTGCCCTCATAGTGATCAAGATTTGCCTGAAAAGAAGATCGAGAATAACAACATTATAGTGACTGCAGAAAGGTCCCCTAAAAGTGATCAAGATTTGGCTGAAGAGGAAGTGGTTATCCACCCTGCCGTGACCAAGAAACCAAGATCAGAGTATAACAAGAGGGTCACTGGGAAAAGGTGCCGCCGAAGTGAGAATGAGGTTGAAGAAGAAGTGGTCATCAACAACCCCGTGGGCAAGAAATCAAGAAGCACAACTAGTATTAAGTTAAAGATGAATGCAACTAGTCCATCACCAAAGACTAGTCCATCTTCATCAAATTTGTCACCAGATACCTCTCCATCATCATCAAATTCAAACCGATCACCAAGTACTTCTACTTTTCCATCAAATTCGTCACCACCACCAGATCACACCACTCCTACTCCTCCATCATCACCAAATTCACCACCAAATAATCCATCATTACCAGCATCATCAAATGCGGCACCACCCGATATGCCTGTTGAATTCAAGAACAAGATCCTGGAGTTGAATGGCACAGATATTGTGTTTATCATGCACAAGACACTTTGCGAGACGGATGTGAACCCGAACAATGATCGCATGTCAATGCCACTGACTCAAATCGTGTATGAGTTTCTTACTGAAGCTGAGAAGGAAGCATTAGAGGAAAGAGACAGAGACCGCAAGAAAAAATTCCTTATTGGTCTAAAAGTGGCAGTGTTAGACCCATGCCTCAGAGAGTTTACTCTGAAATTGAAGAAGTGGAAAATGAACACAACAAGCACGTACAACTTATCTTCTCAATGGAAAAGAATTGTTTCGAGTAACGATCTGAAAAAGAATCAAGAATTGGATATATGGTCTTTTAGGGTCCAAGACAAACTGTACTTTATATTCAATAAACTCTGA 1200 0.42 MRDKEALKGLLALDRETLDMMSSKPFEPRFLDVIVSMDAQHLYSEENLAEIRNIHQELQQQQQQQQQHSSQDADAAAAAVIPEKTEDNNMMVTAERCPHSDQDLPEKKIENNNIIVTAERSPKSDQDLAEEEVVIHPAVTKKPRSEYNKRVTGKRCRRSENEVEEEVVINNPVGKKSRSTTSIKLKMNATSPSPKTSPSSSNLSPDTSPSSSNSNRSPSTSTFPSNSSPPPDHTTPTPPSSPNSPPNNPSLPASSNAAPPDMPVEFKNKILELNGTDIVFIMHKTLCETDVNPNNDRMSMPLTQIVYEFLTEAEKEALEERDRDRKKKFLIGLKVAVLDPCLREFTLKLKKWKMNTTSTYNLSSQWKRIVSSNDLKKNQELDIWSFRVQDKLYFIFNKL* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1135 399 MobiDBLite consensus disorder prediction 145 261 - -
Dod04g1135 399 MobiDBLite consensus disorder prediction 58 73 - -
Dod04g1135 399 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 8 396 IPR005508 GO:0003677
Dod04g1135 399 PANTHER DUF313 DOMAIN PROTEIN 8 396 - -
Dod04g1135 399 Pfam B3 domain-containing protein At2g31720-like 274 371 IPR005508 GO:0003677
Dod04g1135 399 Coils Coil 44 71 - -
Dod04g1135 399 Gene3D - 272 398 IPR015300 -
Dod04g1135 399 MobiDBLite consensus disorder prediction 173 228 - -
Dod04g1135 399 MobiDBLite consensus disorder prediction 229 253 - -
Dod04g1135 399 MobiDBLite consensus disorder prediction 58 77 - -
Dod04g1135 399 SUPERFAMILY DNA-binding pseudobarrel domain 280 397 IPR015300 -
Dod04g1135 399 MobiDBLite consensus disorder prediction 145 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1135 Dod-Chr4 31993781 31994980 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1135 247 394 B3 DNA Binding Superfamily AT1G05930 28.000 1.61e-10 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1135 - - gmx:102669231 173.711