Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1110 ATGGAGGGCAGTACAAGCTCTGAACTCCCACCTGGCTTTAGATTTCACCCGACAGATGAGGAACTAATCGTGTACTACCTTTGTAACCAAGCCACATCAAAGCCATGCCCTGCATCCATCATCCCAGAAGTGGATATCTATAAATTTGATCCATGGGAATTGCCTGGTAAGGCTGGGTTTGGAGCAAAAGAACGGTACTTCTTTACCCCAAGAGAAAGGAAGTACCCAAATGGGGTGAGGCCTAACCGTGCAACTGTCTCTGGGTATTGGAAGGCTACAGGCACAGACAAGGCTATTTATAGCAAGTCTAAGCATGTTGGGGTGAAGAAAGCTTTGGTCTTTTACACTGGTAAGCCACCAAAGGGCATCAAGACTGACTGGATCATGCATGAGTATAGACTGGCTGAATCAAAAAGACAAGCTAGTAACAAGCCAATTGGTTCCATGAGACTGGATGACTGGGTTTTGTGTAGGATATATAAGAAGAAGCATGCAGCAAATGCATTGGAGCAAAGGGAGGAATATCCAACAGTTCAAATTAATCTCACAGCAGCAAGTAATGATGTTGAACAGGAAACGATGAACCTACCAAGGACTTGTTCCCTTACATATCTTATGGATTTGGATTACCTTGGTCCAATTTCACAGCTATTATCTGATGGACCCTATAACTGCACAACCTTTGATTTCCAAAATAGCACTGACAATGTTGGGATGGACCCGTTTGTGAAGCCTGAGCTGCTTGAGATGACTAACCATTATGCAGAAGATTCAGACAAGTACCAGCTGAAACAGAGCAGCACCATCAACCAGCACATATTTGTGCAGCAAGTGCATGATCTGAGGGGATATGACCAACAAAAAAAATGA 870 0.4379 MEGSTSSELPPGFRFHPTDEELIVYYLCNQATSKPCPASIIPEVDIYKFDPWELPGKAGFGAKERYFFTPRERKYPNGVRPNRATVSGYWKATGTDKAIYSKSKHVGVKKALVFYTGKPPKGIKTDWIMHEYRLAESKRQASNKPIGSMRLDDWVLCRIYKKKHAANALEQREEYPTVQINLTAASNDVEQETMNLPRTCSLTYLMDLDYLGPISQLLSDGPYNCTTFDFQNSTDNVGMDPFVKPELLEMTNHYAEDSDKYQLKQSSTINQHIFVQQVHDLRGYDQQKK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1110 289 Gene3D NAC domain 18 167 IPR036093 GO:0003677|GO:0006355
Dod04g1110 289 ProSiteProfiles NAC domain profile. 9 162 IPR003441 GO:0003677|GO:0006355
Dod04g1110 289 Pfam No apical meristem (NAM) protein 10 134 IPR003441 GO:0003677|GO:0006355
Dod04g1110 289 PANTHER NAC TRANSCRIPTION FACTOR 56 1 239 - -
Dod04g1110 289 PANTHER NAC DOMAIN-CONTAINING PROTEIN 1 1 239 - -
Dod04g1110 289 SUPERFAMILY NAC domain 6 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1110 Dod-Chr4 31613764 31615277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1110 1 217 NAC Transcription Factor Family AT1G69490 65.502 6.08e-108 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g1110 NAM 3.2e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1110 - - gmx:732552 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1110 04 31613764 31615277 Dod04g1110 04 31613764 31615277 ECH