Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1102 ATGGATCTGCAAAATGTGCAAAGCCAAAGTATGCACTTGGTTCTTTCAACTGATGCAAAGCCAAGGCTGAAATGGACTCCTGAGCTTCACCAACGATTCACTGAGGCAATTAACCAGCTTGGAGGTGCAGAAAAAGCAACACCAAAGAGTCTTATGAGGGTGATGGGGATTCCGGGACTCACTTTGTACCACCTCAAGAGCCATTTACAGAAATATAGGCTTGGGAAAAGCCAACAGCTAGAAATCTGCCCTGACAACAAACATGAAGATTGCAGAGAGATCAACAGCAGTGATGGTCCTTGCAGCAGGGAAGTCAGTTTTGGGACCCAGAATGAGATGACTGAGACCATGCAGATTGCTCAGGCTCTCCAAATGCAAATGGAAGTACAGAAGAAACTCTATGAACAAATTGCGGTGCAGAGACATTTGCAGCTTAAGATTGAAGCTCAAGGGAAGTATTTGCAGTCAGTACTAAAGAAGGCACAGGAAACACTTGCAGGATACAGTTCTTCCACAGTGGGCGTAGAACTTGCAAAAGCTGAACTTTCTCAGTTATTATCAACAATCAACAATGGCAGCCCAAGTTCTCCCATGTCAGAACTGACAGAAACAAGAGGGTTCAGTTTGAACCTTGGGGAGAGGAAACAAAATAGAGGGACTATGTGTTCACTGGAAAGTTCTTTGACATCTTCTGAAAGCTCTGGGAGAAAAGAAGAGAAGCAGCCCTTGGATCAAGAAGCAGATAACCTTAAACAGGCTAATAGTACTGTTTCAGTTGAATTGCCATTATTGGCCATTCATCCAGAACATAAAGCATCCAAGGCAGATACAAGTCATGAAGCTGATGGGAGGAAGAGAAGTGCTGATTCTGATGGTAGCTGTGTTGATCAACCATCTGGGGGGAACAGATGTGGAAACAAGTTGAGGAAATCTGAATGGTCAGGAATGCTTGACTTGAACAGCTGTTCAAAAGAAATAGATTTAAATTGCAGTTCAAGCTCTTGGGGACAATGA 1014 0.4359 MDLQNVQSQSMHLVLSTDAKPRLKWTPELHQRFTEAINQLGGAEKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQLEICPDNKHEDCREINSSDGPCSREVSFGTQNEMTETMQIAQALQMQMEVQKKLYEQIAVQRHLQLKIEAQGKYLQSVLKKAQETLAGYSSSTVGVELAKAELSQLLSTINNGSPSSPMSELTETRGFSLNLGERKQNRGTMCSLESSLTSSESSGRKEEKQPLDQEADNLKQANSTVSVELPLLAIHPEHKASKADTSHEADGRKRSADSDGSCVDQPSGGNRCGNKLRKSEWSGMLDLNSCSKEIDLNCSSSSWGQ* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1102 337 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
Dod04g1102 337 MobiDBLite consensus disorder prediction 269 291 - -
Dod04g1102 337 MobiDBLite consensus disorder prediction 210 251 - -
Dod04g1102 337 MobiDBLite consensus disorder prediction 232 246 - -
Dod04g1102 337 Gene3D - 19 77 - -
Dod04g1102 337 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Dod04g1102 337 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 332 - -
Dod04g1102 337 MobiDBLite consensus disorder prediction 269 308 - -
Dod04g1102 337 MobiDBLite consensus disorder prediction 210 231 - -
Dod04g1102 337 Pfam MYB-CC type transfactor, LHEQLE motif 117 164 IPR025756 -
Dod04g1102 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 332 IPR044848 GO:0003700
Dod04g1102 337 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1102 Dod-Chr4 31426421 31428724 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1102 11 298 G2-like Transcription Factor Family AT1G69580 54.276 2.11e-80 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Dod04g1102 Myb_DNA-binding 1.2e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1102 - - gmx:100784670 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1102 04 31426421 31428724 Dod04g1102 04 31426421 31428724 ECH