Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dod04g1097 | ATGAGCGATCATCTGGTGCTGTACGTGGACCGCCTGGTGCGCCCCGTTGTGCCGGTGGAGCCGCTCGTTCAGCATCCCGCTCAGCCATCCCCGGAGCCCGATCCGGCGCCCATGGATGCGGCGGCGGGGCCATCCGGCTCTGCTCCTGCGGCGGCGGAGGAAGACGAGGACGGCGGTGGTGATGAGGAGGAGCCGCTGTTGCAGATAGCGGAGTGTCGCATTTGTCAGGACGAGGACAGCCTCAACAATCTCGAGGCACCCTGCGCCTGCAGCGGAAGTCTCAAGTATGCTCACCGAAAGTGCGTTCAGCATTGGTGTGATGAGAAAGGAGACATAACTTGTGAGATATGCCATAAGCCCTATCAACCTGGTTATACTGCCCCACCACCACGTCCACATCCTGAAGAAACTACCATTGATATAGGTGGAGGCTGGACAATCTCTGGCACACCCTTGGACTTGCGTGATCCTCGTCTCTTGGCAATTGCTGAGGCAGAACGCCAATTCTTGGAAGCAGAATACGATGGATATGCCGCTTCTAATGCCAGTGGAGCTGCATTTTGCCGTTCAGCTGCGCTAATTTTAATGGCCCTTTTACTCTTGAGGCATGCACTGTCAGTCACCGATGGTGATGCTGATGATGACCCATCCACTTTCTTTTCTCTTTTCTTGCTTCGAGCTGCCGGATTTCTTTTGCCTTGCTACATCATGGCTTGGGCAATCAGTATTTTGCAACGAAGGCGACAGCGACAAGAGGCTGCAGCACTGGCGGCAACTCAAGTTGCTTTTGTTTTACAATCCGGGCAGCGTAGGGGTCTGCAATTTGCCATAACACCAGGACCAACAACAGTGAATGCACCCGAGGAACAAGTGTAG | 876 | 0.5468 | MSDHLVLYVDRLVRPVVPVEPLVQHPAQPSPEPDPAPMDAAAGPSGSAPAAAEEDEDGGGDEEEPLLQIAECRICQDEDSLNNLEAPCACSGSLKYAHRKCVQHWCDEKGDITCEICHKPYQPGYTAPPPRPHPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDGYAASNASGAAFCRSAALILMALLLLRHALSVTDGDADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQRRGLQFAITPGPTTVNAPEEQV* | 292 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dod04g1097 | 291 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED | 1 | 284 | - | - | |
Dod04g1097 | 291 | MobiDBLite | consensus disorder prediction | 23 | 62 | - | - | |
Dod04g1097 | 291 | CDD | RING_CH-C4HC3_MARCH | 72 | 118 | - | - | |
Dod04g1097 | 291 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 1 | 284 | IPR033275 | - | |
Dod04g1097 | 291 | Coils | Coil | 160 | 180 | - | - | |
Dod04g1097 | 291 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 64 | 124 | IPR011016 | GO:0008270 | |
Dod04g1097 | 291 | SUPERFAMILY | RING/U-box | 71 | 122 | - | - | |
Dod04g1097 | 291 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 60 | 127 | IPR013083 | - | |
Dod04g1097 | 291 | MobiDBLite | consensus disorder prediction | 23 | 38 | - | - | |
Dod04g1097 | 291 | Pfam | RING-variant domain | 72 | 117 | IPR011016 | GO:0008270 | |
Dod04g1097 | 291 | SMART | ringv_2 | 71 | 118 | IPR011016 | GO:0008270 | |
Dod04g1097 | 291 | Pfam | Protein of unknown function (DUF3675) | 123 | 241 | IPR022143 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dod04g1097 | Dod-Chr4 | 31327369 | 31330030 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dod04g1097 | 52 | 121 | C3H Transcription Factor Family | AT2G22120 | 36.986 | 7.45e-07 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Dod04g1097 | - | - | ahf:112734090 | 414.461 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Dod04g1097 | 04 | 31327369 | 31330030 | Dod04g1097 | 04 | 31327369 | 31330030 | ECH |