Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1089 ATGACCCTTGGGATCTTCCAAAGTTGGCAACCACAGGAGAAAAAAGAGTGGTATTTCTACTGTCCCAGAGATAGAAAATACAGGAACAATGCAAGGCCTAATAAGGTAACAGGAGCTGGTTTCTGGAAAGCCACAGGGACTGACATGCTTATCTACTCCTCAGAGGGTTCCAAGTGCATTGGCCTCAAGAATTCCCTGGTCTTCTACAAAGGCAGAGCTACCAAAGGTGTCAAAACTGATAGGATGATGCACGAGTTCAAGCTGCCTTCTCTCACAGACTCATCTTCATCCCTAAAAAAGTACTTGGACAATACTATTCCTACTAATAACCCTTGGCTAATCTATAGGATATTCAAGAAAACCAATGCTACTGCTCAAAGAGTTCTCTCTCACTCTTGGGTCTCTACATTACCTAAAACAAGCACCTTTGATATGCTAACCAATGATAGAGACACCAACCAATTTTGTTCAGCCAACTTGCCATTGGCAAAGAAAACTAGCTTAGTGAACCAGTTTTGTACTAACTGCAATGACACACAGCACTTAACCATTACTACTACTAGTATTAGTACTCTTTGTCCTTTAGATGTTGCCTCTTATAAACCCCTTATTAATCCACTGTTTTACAAACCCTTTGATCAGTTACCCATTTCAAATGGACATCTTAACATTAATGGCTCAGTATTCTCATCTCCTCTTGAAACATCTACTGTTAGTGCTAAATCTACAATGGATGTTTCTTCCTTGCTGTTAAATATGTCATCCTCTGTGCTTTGA 777 0.4003 MTLGIFQSWQPQEKKEWYFYCPRDRKYRNNARPNKVTGAGFWKATGTDMLIYSSEGSKCIGLKNSLVFYKGRATKGVKTDRMMHEFKLPSLTDSSSSLKKYLDNTIPTNNPWLIYRIFKKTNATAQRVLSHSWVSTLPKTSTFDMLTNDRDTNQFCSANLPLAKKTSLVNQFCTNCNDTQHLTITTTSISTLCPLDVASYKPLINPLFYKPFDQLPISNGHLNINGSVFSSPLETSTVSAKSTMDVSSLLLNMSSSVL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1089 258 ProSiteProfiles NAC domain profile. 1 120 IPR003441 GO:0003677|GO:0006355
Dod04g1089 258 PANTHER PROTEIN FEZ ISOFORM X1 14 258 - -
Dod04g1089 258 SUPERFAMILY NAC domain 12 120 IPR036093 GO:0003677|GO:0006355
Dod04g1089 258 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 258 - -
Dod04g1089 258 Gene3D NAC domain 5 125 IPR036093 GO:0003677|GO:0006355
Dod04g1089 258 Pfam No apical meristem (NAM) protein 12 88 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1089 Dod-Chr4 31205953 31206995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1089 14 255 NAC Transcription Factor Family AT1G26870 49.200 1.09e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dod04g1089 NAM 1.9e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1089 - - vun:114179488 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1089 04 31205953 31206995 Dod04g1089 04 31205953 31206995 ECH