Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1078 ATGAATAATATGAGTGAGATAACGATCACGGAAGAAGCTGACCAACAAAATGGGATCCGCAGACCCAATTTCCCGCTGCAATTATTAGAGAAAAAAGACGATCAACAGCAGCAGCAGCAGCATCAGACACCGTGTACCACCGCACATGGCGGCGAATGCGACGGCGCCAAGAAGCCACCGCCGAAGCGTGCGTCCACTAAGGACAGGCACACGAAGGTGGATGGGCGCGGCCGCCGGATCCGCATGCCGGCGGCCTGCGCCGCCAGGGTGTTCCAGCTGACGCGGGAGCTGGGGCACAGGTCCGACGGCGAGACCATCGAGTGGCTTCTCCAGCAGGCGGAGCCCGCCGTCATCGCCGCCACCGGCACCGGCACCATCCCCGCCAACTTCACTTCCCTCAACATCTCCCTCCGCAGCTCAGGCTCAACTCTTTCTTCCCCTTCTCACTACTTCAGAGGAACCTACTTCAACCCGGCGACAACAAGCTTCTCCGCCGCAAGGAGCCGCAGCGAGTTGGCTAGGAACGTGGCAGTGGAAGATTATTCTAGAAGGTTCTTGTTCCCTGCAGGGAGTGATAGCTCTTTTTCTGCTGCTTTGAACTTCAACAACGCTGTCAATGATGTTAATCTTATGCAAAGCAAGCAAGAGGTTCGCGAAGAAGCCGAAGGCGGCGGTGGCGAGGGTTTGGGGAGGAAGAGGAAGCAAGAGGAAGTTGTGTCGCGTGGTGATACTCACACGATGGGGAGCTATTTGTTACAGTCGAGTACGGGGTCGATTCCGGCTAGTCATGCTTCTATTCCGGCTACTTTTTGGATGATGAATGGCGGTGGTGGCGGTGGCAGCGGTGGTAATAGTGGTGGTGATGCCGTTTGGGCAATTCCATCGGTCGGTAATGGTAATATGTATAAAGGGGCAGTGCCTCATTTCATGAATTTTGCGTCTCCAATGTCCCTATTGCCTGCTCAGCAGCTAGGTTCAGGTGTGGTTGGTGGTGGTGCAATGGTAAGTGAGAGCCACTGGGGCATGCTTGCAGCCCTTAATGCACATAGGCCTGTTCTGGCAGCTTCCGGCGGTGTTCCGGAGTCTCCGGCCAGTGGCGGCCAGCATCTACATCATGGAGGAGAACATGAGGGACATGAAGGAAGCCAACATTGA 1155 0.5584 MNNMSEITITEEADQQNGIRRPNFPLQLLEKKDDQQQQQQHQTPCTTAHGGECDGAKKPPPKRASTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHRSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTLSSPSHYFRGTYFNPATTSFSAARSRSELARNVAVEDYSRRFLFPAGSDSSFSAALNFNNAVNDVNLMQSKQEVREEAEGGGGEGLGRKRKQEEVVSRGDTHTMGSYLLQSSTGSIPASHASIPATFWMMNGGGGGGSGGNSGGDAVWAIPSVGNGNMYKGAVPHFMNFASPMSLLPAQQLGSGVVGGGAMVSESHWGMLAALNAHRPVLAASGGVPESPASGGQHLHHGGEHEGHEGSQH* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1078 384 MobiDBLite consensus disorder prediction 354 384 - -
Dod04g1078 384 Pfam TCP family transcription factor 65 175 IPR017887 -
Dod04g1078 384 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Dod04g1078 384 MobiDBLite consensus disorder prediction 1 74 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 55 74 - -
Dod04g1078 384 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 54 384 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 30 47 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 216 241 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 216 242 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 1 22 - -
Dod04g1078 384 MobiDBLite consensus disorder prediction 370 384 - -
Dod04g1078 384 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 54 384 IPR005333 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1078 Dod-Chr4 30967804 30969221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1078 56 323 TCP Transcription Factor Family AT3G47620 46.104 9.79e-53 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dod04g1078 TCP 5.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1078 - - aip:107633962 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1078 04 30967804 30969221 Dod04g1078 04 30967804 30969221 ECH