Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1074 ATGGTGCAAAGACCTCCCGAAGGACATGATGCTCCCTCTAGTGCAGATTCCTATGCTGAAACCACTAATGATATTCCAAATCAATCCTTAGATGAAAGCCATATAGCAAACAGTAGCACTCCTGAAAATGAATCCAGTAGCAATACAGCAAATCGGACATTGCCCAATGGTGCCAAAACACAAAGTGGAAAGGCAGAGCGGGTAGTGCAGGATGAACCAGGTGTGTACATAACTTTGTCTGCCCTGGCAGGGGGTGGTAATGAACTCAAGCGCGTTCGCTTCAGTCGGAGGCATTTCACAGAAGCACAAGCTGAGAAGTGGTGGGCTGAAAATGGAACCAAAGTATTGGAGCGGCACAATATAGTTGCTTCATAG 375 0.4667 MVQRPPEGHDAPSSADSYAETTNDIPNQSLDESHIANSSTPENESSSNTANRTLPNGAKTQSGKAERVVQDEPGVYITLSALAGGGNELKRVRFSRRHFTEAQAEKWWAENGTKVLERHNIVAS* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1074 124 MobiDBLite consensus disorder prediction 15 60 - -
Dod04g1074 124 PANTHER REGULATOR OF CHROMOSOME CONDENSATION 1 118 - -
Dod04g1074 124 MobiDBLite consensus disorder prediction 1 71 - -
Dod04g1074 124 Pfam Transcription factor regulating root and shoot growth via Pin3 65 119 IPR013591 -
Dod04g1074 124 ProSiteProfiles BRX domain profile. 65 120 IPR013591 -
Dod04g1074 124 PANTHER REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1074 Dod-Chr4 30937120 30939133 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1074 63 121 Major Intrinsic Protein MIP AT1G31880 50.847 7.46e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1074 - - lja:Lj0g3v0293039.1 184.496