Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1059 ATGGGAAATTCTTTGAGGAAGAGTGCTCACAATCCCAATCAACCAGTTCGTATAGCTCAATCTCCCATTGGAAAAGGAAATAAAGGTGAAAGGCATGGTTATTTACCTTCTCCAAAGGATTGGAATGTCTCAAAATTGGACAAGAAAATAATGCTCCAAAGCTTTAAGCTCAAGCGCTTTAGCTACAAAGTATTGAAAGATGCTACTGGGAAGTTCAGCTATGTGAACATAATAGGCCAAGGAGGCTTTGGTGATGTTTATAAGGGATATCTTACTCACTGCACCATGAATGCTGCAACAGCAAATGAGGGCTTCCCCGTAGCTGTTAAGAGAATCAGGATGCCTGGAGCACAAGGCAATGAAGCATGGCTGAACGAAGTGACATACTTGAACAGTTTGAACCATCCAAATGTAGTTAAGCTCATAGGGTTTTGCAATGAAGGTGAGCACAGAATGCTTGTTTATGAATACATGATTGGTGGAAGCTTGGAGGATCACCTCTTGAAGGGTAAATTAAATTGGACTAGAAGGATTCAAATAGCAGCTGGGGCAGCGAGAGGATTAGAATATCTTCACACTTATGGAAGGCCACTTGTTCATCGTGATATTAAATCTTCCAATGTCCTGCTGGATGCTAACTTCAATGCCAAGATCTCAGATTTTGGCCTGGCTAGATACGGACCTGAAGGAGAACATACCCATGTATCCACCAGAATCCTTGGCACTAGGGGTTACTTTGCCCCGGAATACGTAACCACAGGGCATTTGACACTTAAAGCCGACGTGTACAGCTTTGGAGTTGTTTTGCTAGAGATTTTATCTGGCTCCGGTGCAATCAGACAACATTCAAATGGAGGTGTGGGGGATCTGGCCCTGTGGGCTGAGCCATTTCTAGGCAAGAAGGTGGGCCTCCGGCAAGTTATTGACAGGAGACTCAGAAACACTGTTCCAGTGAAAGAAGCCAGCCAGTTAGCTGAATTAATACTCATGTGCCTATGTCCTTGTCACAAGCAGCGACCAACAATGGCTGAAGTTGTGGCTAATCTAGAGCAACTAGAGCTAAAATCGGAACTGCATAATCAGAGATCTCATGGCAGAACCAATAACCCTACTCCTGATAGAACTAAAAGATTGCTCCTTCATAATGTACCTTAA 1155 0.4364 MGNSLRKSAHNPNQPVRIAQSPIGKGNKGERHGYLPSPKDWNVSKLDKKIMLQSFKLKRFSYKVLKDATGKFSYVNIIGQGGFGDVYKGYLTHCTMNAATANEGFPVAVKRIRMPGAQGNEAWLNEVTYLNSLNHPNVVKLIGFCNEGEHRMLVYEYMIGGSLEDHLLKGKLNWTRRIQIAAGAARGLEYLHTYGRPLVHRDIKSSNVLLDANFNAKISDFGLARYGPEGEHTHVSTRILGTRGYFAPEYVTTGHLTLKADVYSFGVVLLEILSGSGAIRQHSNGGVGDLALWAEPFLGKKVGLRQVIDRRLRNTVPVKEASQLAELILMCLCPCHKQRPTMAEVVANLEQLELKSELHNQRSHGRTNNPTPDRTKRLLLHNVP* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1059 384 SUPERFAMILY Protein kinase-like (PK-like) 46 349 IPR011009 -
Dod04g1059 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Dod04g1059 384 MobiDBLite consensus disorder prediction 1 20 - -
Dod04g1059 384 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC-LIKE 17 364 - -
Dod04g1059 384 Gene3D Phosphorylase Kinase; domain 1 42 157 - -
Dod04g1059 384 Coils Coil 342 362 - -
Dod04g1059 384 ProSitePatterns Protein kinases ATP-binding region signature. 78 110 IPR017441 GO:0005524
Dod04g1059 384 ProSiteProfiles Protein kinase domain profile. 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1059 384 PANTHER OS01G0588500 PROTEIN-RELATED 17 364 - -
Dod04g1059 384 MobiDBLite consensus disorder prediction 1 36 - -
Dod04g1059 384 CDD STKc_IRAK 78 352 - -
Dod04g1059 384 SMART serkin_6 72 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dod04g1059 384 Gene3D Transferase(Phosphotransferase) domain 1 158 372 - -
Dod04g1059 384 Pfam Protein tyrosine and serine/threonine kinase 75 349 IPR001245 GO:0004672|GO:0006468
Dod04g1059 384 MobiDBLite consensus disorder prediction 357 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1059 Dod-Chr4 30571616 30573802 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1059 57 366 Receptor kinase-like Gene Family AT3G58690 43.887 6.48e-83 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod04g1059 PK_Tyr_Ser-Thr 1.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1059 - - aprc:113859637 491.5