Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1057 ATGGGAAGACAAAGTCCTGGAAAATGGATCAGAAACTTTTTTCTGGGGAAGAAATCATCTTCAAAGTCTAATTCATCAAAAAAGAAGGGTATTTCTAGACCTTCAAGTGACAAGGATGTGCTGGTGGTGTCATCTGAGGGATCCGTGCCTATTCCAACTGTGACATCCCCTCCAACATCTTATGCTACCAAAGTAGTGATATCAGAAAACGATGTAGTTAGTGGATCATCAAATGAGAAGGTTATTCTTGCAATTGGAGATGAAGTGGCCAATGCACGAGAAGATTTTGCTACTAGTATTGATCCTGACGATCATGTGGAGAACACCAGGCTTACAGAAGCAGCTATAATAGCTCAAGCTGCTTTTAGAGGCTATCAGGCACGTAGGACACTTCAAATACTCAAAGGTATCATACCCCTCCAAGCCCTTATTCGTGGCCAGTTGGTTAGAAGAGAAGCTGTTTCTGCTCTATACTGTGTGAAGGGGATAGTTAAATTTCAAGCATTGGCTCGTGGCTACAAGGTTAGGCACTCAGGTATTGGGCTTGAAGTCCAGGAAATTTGTAAGGATACTAAATGTTCTAATTCTATTGAGCTAATCGCACCCAGAAAGGCAGAGAAGCTGTCAGATAATGTCTTTGTTCTAAAGCTTCTGGCTTCATCGCCCTCTGCAGTTTCTCTACATCTCAAATATGATTCTAGAGAACCTAACTTGGCTTGGGAATGGCTTGACCGGTGGACAAGATCACACTTTTGGGCACCTCTTGCAGAACTGAAGAAACTTGACTCGGTGTCTGATGGGAAAAATGGTATTTGCCAACCACTTGAAACCAATGAGGGTCAAGTCAAAAGAAATGCCCGGAAAGCACCTGCTGTGAGGGTTGACGAGAGTCCAAAATTGATTCAAACATCCCATTGCATTCACCTAAGGAACATTCACAAAAGGAAAATGGGAGAAGCAACTCTCAAAAATACAGCATGCAGAATGTTTCTGATAGACATGAGGCTGCTAATGAGAAAAGAAAACGCGTTACAAGAAGTAGTTCTGCTCATAGTGTCACTGATGTTACACAGCAAGCAAAAGATGAGCACAATAATGTGTCACATAATGATACTGTTGCTGTCTTGA 1128 0.4211 MGRQSPGKWIRNFFLGKKSSSKSNSSKKKGISRPSSDKDVLVVSSEGSVPIPTVTSPPTSYATKVVISENDVVSGSSNEKVILAIGDEVANAREDFATSIDPDDHVENTRLTEAAIIAQAAFRGYQARRTLQILKGIIPLQALIRGQLVRREAVSALYCVKGIVKFQALARGYKVRHSGIGLEVQEICKDTKCSNSIELIAPRKAEKLSDNVFVLKLLASSPSAVSLHLKYDSREPNLAWEWLDRWTRSHFWAPLAELKKLDSVSDGKNGICQPLETNEGQVKRNARKAPAVRVDESPKLIQTSHCIHLRNIHKRKMGEATLKNTACRMFLIDMRLLMRKENALQEVVLLIVSLMLHSKQKMSTIMCHIMILLLS* 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1057 375 Gene3D - 108 180 - -
Dod04g1057 375 ProSiteProfiles IQ motif profile. 135 162 IPR000048 GO:0005515
Dod04g1057 375 MobiDBLite consensus disorder prediction 15 39 - -
Dod04g1057 375 PANTHER IQ-DOMAIN 5-RELATED 1 323 - -
Dod04g1057 375 Pfam IQ calmodulin-binding motif 112 131 IPR000048 GO:0005515
Dod04g1057 375 Pfam IQ calmodulin-binding motif 161 176 IPR000048 GO:0005515
Dod04g1057 375 SMART iq_5 110 132 IPR000048 GO:0005515
Dod04g1057 375 SMART iq_5 133 154 IPR000048 GO:0005515
Dod04g1057 375 SMART iq_5 158 180 IPR000048 GO:0005515
Dod04g1057 375 ProSiteProfiles IQ motif profile. 111 135 IPR000048 GO:0005515
Dod04g1057 375 MobiDBLite consensus disorder prediction 16 30 - -
Dod04g1057 375 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1057 Dod-Chr4 30489622 30495260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1057 1 314 IQD Protein Family AT1G14380 35.329 4.03e-41 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1057 - - gmx:100800688 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1057 04 30489622 30495260 Dod04g1057 04 30489622 30495260 ECH
Dod04g1057 04 30489622 30495260 Dod05g1719 05 42547533 42554644 ECH