Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1054 ATGGAAGAGGCTAGAGAAGAAAATTGGAAATTGAAAGAATTATTTCCAAAGGATTATCAATCAACGCAAATGCAGTTCTTTGACATCCTTCAACAAGACAAACAAGAAGAAGCTGCCAAAGCCACAGGTACTAGCCATGAAGAAGAAAGTGGACTTGTCTCCCTTTCTCTTGGTATCTCATCCAAAGGCCCTAGCCTTACCATGGATGAGAAAAAGAGTAGCAATAGAAATGCAAAGATCAGAGAGGAGAATTTAGATAATGAAGGACTTGCACTTGGGTTGGATATCAGATTTGAACCCTCATCCTCATCAGCTCAAGCTGAAGCTAGCCCTAAACGCAGCTTTGATGGGCAAGGGAAGGAAGAGGAACTCTTTGAGGTGTGGCCACCCAGTAAAGTTCTGAAGAAAGCAACAACAGGGGATAGTGACACTCCTCAACTCAAAAACCCTAGGGTTTCTATCAGAGCCAGATGTGACACCCAAACGATGAATGATGGATGTCAATGGAGAAAATATGGACAAAAGACAGGAAAAAGAAATCCATGGCCTCGATCATACTATCGATGCAGAGTTTCTCCCTCTTGTCCTGTGAAAAAACAGGTTCAAAGATGTTCTGAAGACATGTCAATCTTGATCACCACCTATGAAGGAACCCACAACCACCCACTTCCTTCTTCAGCCACTGCCATTGCATCCACAACTTCTGCAGCTGCTTCCATGCTTCAATCTTCCCCATTGATCTCGCAACAAAGACTAGCCAATTCAGATCCACTTCCCATTATAAATCCTAGTGTTGCTCATAACCTTAATACCCCAAACTTCACATCATGCTGCCAGCAATTTTCAAGAACACAACAGTTGTACTTCCCCTACTCATCATTCATTTCAACATCCAATTCTCACCCCACAATTACTCTCGACTTTACAGCACCTCCAACTTCATCTAGTTTTGGAAAATTCTTCCCAAGCTTCTCTTCCATGTCATCAGCAAACCTTAGTTTTTCCTCAATTTTCTCTCCGTTGCAATCTAGTGTGATAGACTCAGCTTGGATTAGCCCTCATAGTGGTTACTTCAACTATGAGGGAAGTATCATCCAAAATAGAAACCAAAATGGTTCCCTAATGAACATTGGAAATCAAACATTTCAAGGGCATCTATACCAGCCTAATTACATGAGCAGCCATACCATTTCTCAACTCCCTTTACGAGGTTCCATTGCAAGTGCTGAAGCCAAGGCAATTACAGCCAACCCAAAATTCCAATCAGCAGTAGCATTAACTGTTCTCCCAACATATGTTGGTAATGATTATGGAGCTGATGGTGGCGGTGTGAGAGAAAATCATGTTGATGCCGAAAGTGCAGCTTTGAACTTGAAGCTAGGTGGAGACATGTCATATACAAAGAACACAGTTTACAGTCCTAGCCAGAATGGCATAGGATGTGGATCATCAAAGTCGCTGAATTTGTCTTCCTCTTCCCTTGATGCTCAACAAGGAAACATTACACTTCCATTGCCAGAACCACCTAAAAGTTCCTATGGTTCGCCTTTTAAGAAAAGTAACCAATTCTTGCTGCCAAGGAAGTGA 1587 0.4216 MEEAREENWKLKELFPKDYQSTQMQFFDILQQDKQEEAAKATGTSHEEESGLVSLSLGISSKGPSLTMDEKKSSNRNAKIREENLDNEGLALGLDIRFEPSSSSAQAEASPKRSFDGQGKEEELFEVWPPSKVLKKATTGDSDTPQLKNPRVSIRARCDTQTMNDGCQWRKYGQKTGKRNPWPRSYYRCRVSPSCPVKKQVQRCSEDMSILITTYEGTHNHPLPSSATAIASTTSAAASMLQSSPLISQQRLANSDPLPIINPSVAHNLNTPNFTSCCQQFSRTQQLYFPYSSFISTSNSHPTITLDFTAPPTSSSFGKFFPSFSSMSSANLSFSSIFSPLQSSVIDSAWISPHSGYFNYEGSIIQNRNQNGSLMNIGNQTFQGHLYQPNYMSSHTISQLPLRGSIASAEAKAITANPKFQSAVALTVLPTYVGNDYGADGGGVRENHVDAESAALNLKLGGDMSYTKNTVYSPSQNGIGCGSSKSLNLSSSSLDAQQGNITLPLPEPPKSSYGSPFKKSNQFLLPRK* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1054 528 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 509 IPR044810 GO:0003700
Dod04g1054 528 PANTHER WRKY TRANSCRIPTION FACTOR 72B 1 509 - -
Dod04g1054 528 MobiDBLite consensus disorder prediction 47 71 - -
Dod04g1054 528 MobiDBLite consensus disorder prediction 34 82 - -
Dod04g1054 528 ProSiteProfiles WRKY domain profile. 158 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1054 528 MobiDBLite consensus disorder prediction 505 528 - -
Dod04g1054 528 SMART WRKY_cls 163 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Dod04g1054 528 Coils Coil 68 88 - -
Dod04g1054 528 SUPERFAMILY WRKY DNA-binding domain 156 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1054 528 MobiDBLite consensus disorder prediction 101 122 - -
Dod04g1054 528 Gene3D WRKY domain 148 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Dod04g1054 528 Pfam WRKY DNA -binding domain 164 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1054 Dod-Chr4 30452752 30454966 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1054 1 324 WRKY Transcription Factor Family AT5G15130 40.984 9.97e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Dod04g1054 WRKY 3.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1054 - - gmx:102666229 440.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1054 04 30452752 30454966 Dod04g1054 04 30452752 30454966 ECH
Dod04g1054 04 30452752 30454966 Dod05g1716 05 42525695 42531177 ECH