Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1052 ATGCCAACTTCAGAAACAACACTACCATCCTTTGTTCATCACTCAACGACCACCCCTTTTCCTCCCCAAAACCAACCAAGGCACACCTTTTTCTTTTACCCCTTTTTATGTTTTTGTTTTAATCCCATGTTGCCTATGTTTTTTCAATGTGTTTGTTTCCTTGTTTCTTTCTTTTTTGGTAATAATGTGATGATGCTTTCGTCACAGTTGGGTTACAATCCACCAGAGGAACTGTTCGGGCTGGAGGTGGAACTCAATCTGAGCAAAGCTAACTCTGAGACTCGAGAACCAAGGTCCTGGTTTGGTCCAAATGGGCAGTATATCAAAGAGCTACCTTGTCCAAGTTGCCGGGGAAGGGGTTATACTCCTTGTGCTGAGTGTGGAATAGAAAGGTCAAGGTCAGACTGTCCAAAATGTAATGGAAAGGGTATAGTGACTTGCCAGCAGTGCTCTGGAGATTGTGTTATATGGGAAGAATCAATTGATGAGAAACCATGGGAGAGAGCCCGTTCAATTTCACCAGTTAAAGTGAAGGAAGATGACGAAGTTGACAAGTTGGACATAAAGTTAGATGTGAAGAAAAAATCCAAGCGTGTTTACCAGTCACCACCTCCTGAAGTTGGATTAAAGATTAGCCGTTCATTGAAAAGTCTCAATGCCAAAACTGGTCTGTTTAGCAACCGAATGAAGATTATCCACCAGGATCCCAAGCTTCAGGCGCAAAGAGTGGCTGCTATTAAGAAAGCGAAGGGAACTGCTGCAGCAAGAAGGCATACTTCCAAAACTATGAAGGCTTTCTTTAGTGATCCAATAAATCGGCAGAAAAGGAGCTTGGCCATGAAGGGTCATTTTTATACCCCTGTACTCCCATATTTAGTTTTTCATTTGGAAACCTCCAAACCGTGGTTTGGGCAAAAGGTGGTTCTCTCTTAG 933 0.4277 MPTSETTLPSFVHHSTTTPFPPQNQPRHTFFFYPFLCFCFNPMLPMFFQCVCFLVSFFFGNNVMMLSSQLGYNPPEELFGLEVELNLSKANSETREPRSWFGPNGQYIKELPCPSCRGRGYTPCAECGIERSRSDCPKCNGKGIVTCQQCSGDCVIWEESIDEKPWERARSISPVKVKEDDEVDKLDIKLDVKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSNRMKIIHQDPKLQAQRVAAIKKAKGTAAARRHTSKTMKAFFSDPINRQKRSLAMKGHFYTPVLPYLVFHLETSKPWFGQKVVLS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1052 310 PANTHER ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN 63 284 - -
Dod04g1052 310 PANTHER ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN 63 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1052 Dod-Chr4 30382095 30387240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1052 69 285 C2H2 Transcription Factor Family AT5G20220 72.936 4.05e-114 334
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1052 - - var:108323927 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1052 04 30382095 30387240 Dod04g1052 04 30382095 30387240 ECH