Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1047 ATGTTACATTTCAGCAATGTGTTTGTTGTAGTTGAGTGTGATTTGCTTCTTCTTGTTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGAGGGAGGGCTTACTAGAGATGGGTTTGGGTGCTGAGAATGGTAAGGTGGTGGAGTCATTGGATGTGTGTAAATCAAAGGGGTGGAAGAAGAAGAAGAAAGAAGACGGGGTAGTGGAAGAGGAAGAGACTGGGTGTTGGGTTAGGCTGAGGTTATTTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTTAGCGGCACCAGCACTAATTATGCTGAAAGTAAATCAACTAATGATACAAGCAGAGACCAACCAACAGTTCCAGTAGTCTCTTCTACAACCACTAGTAATGCTGAAAGCAATGCATCCACTTCAAAACTTGAAGAGGAACTTAAAGTTGCTTCCAGGCTGCGTAAATTCACTTTCAATGATCTTAAGTTTGCAACAAGAAATTTTCGGCCTGAGAGTCTTCTTGGTGAAGGTGGTTTTGGTTGTGTGTTCAAGGGATGGATTGAAGAAAATGGAACTGCTCCGGTGAAACCTGGCACAGGGCTCACTGTTGCTGTAAAAACCCTCAACCATGATGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAAGTGAATTTTCTTGGTGATCTAGTTCATCCAAATCTTGTTAAACTTATAGGTTACTGCATTGAAGATGATCAAAGGTTGCTAGTGTATGAGTTCATGCCTAGGGGAAGCCTGGAAAACCACTTGTTTAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCACTAGGAGCTGCGAAAGGTCTTGCTTTTCTACATGAGGAAGCTGAACGACCAGTAATATATAGGGATTTCAAGACTTCCAATATACTATTGGATGCAGAGTACAATGCCAAGCTCTCTGACTTTGGACTTGCAAAAGATGGTCCAGAGGGTGATAAAACCCATGTATCTACTCGAGTGATGGGAACCTATGGTTATGCAGCACCAGAATATGTCATGACAGGACATCTGACATCAAGAAGCGACGTGTATAGTTTCGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGACAAAAACCGACCTAATGGTGAACATAACCTTGTGGAATGGGCTAGACCACATCTAGGAGAGCGAAGAAGGTTCTACAGGTTGATAGACCCTCGCTTAGAAGGTCACTTCTCCATAAAAGGAGCTCAGAAAGCCACCAGTCTGGCTGCTCATTGCCTTAGTAGAGATCCTAAAGCCAGACCCCTTATGAGTGAAGTGGTGGAAGCTTTAAAGCCTCTGCCAAACCTTAAGGATATGGCTAGCTCATCATATTATTTCCAGGCGATGCAAGCTGACCGCTTCAGTGCAAGCCCGAATACTCGAAACGGGCGACCACAAGGAGCATTGCTCACCCGGAATGGCCAGAGGAGCCTTTCAATACCACACGGTACACACGCATCTCCATTCCACCATCAATATCCCCAGCAATCACCAAAACCCAATGGCAAGAAACATAGTTGA 1560 0.4513 MLHFSNVFVVVECDLLLLVVVVVVVVVVVREGLLEMGLGAENGKVVESLDVCKSKGWKKKKKEDGVVEEEETGCWVRLRLFGSCISSRSKVDSSVSGTSTNYAESKSTNDTSRDQPTVPVVSSTTTSNAESNASTSKLEEELKVASRLRKFTFNDLKFATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDAEYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKATSLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQAMQADRFSASPNTRNGRPQGALLTRNGQRSLSIPHGTHASPFHHQYPQQSPKPNGKKHS* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1047 519 MobiDBLite consensus disorder prediction 89 136 - -
Dod04g1047 519 MobiDBLite consensus disorder prediction 468 519 - -
Dod04g1047 519 MobiDBLite consensus disorder prediction 468 495 - -
Dod04g1047 519 Gene3D Transferase(Phosphotransferase) domain 1 249 464 - -
Dod04g1047 519 SUPERFAMILY Protein kinase-like (PK-like) 149 465 IPR011009 -
Dod04g1047 519 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 93 507 - -
Dod04g1047 519 CDD STKc_IRAK 169 446 - -
Dod04g1047 519 MobiDBLite consensus disorder prediction 89 135 - -
Dod04g1047 519 Pfam Protein tyrosine and serine/threonine kinase 167 443 IPR001245 GO:0004672|GO:0006468
Dod04g1047 519 ProSitePatterns Serine/Threonine protein kinases active-site signature. 292 304 IPR008271 GO:0004672|GO:0006468
Dod04g1047 519 PANTHER OS01G0588500 PROTEIN-RELATED 93 507 - -
Dod04g1047 519 ProSitePatterns Protein kinases ATP-binding region signature. 169 201 IPR017441 GO:0005524
Dod04g1047 519 Gene3D Phosphorylase Kinase; domain 1 122 248 - -
Dod04g1047 519 ProSiteProfiles Protein kinase domain profile. 163 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1047 Dod-Chr4 30256257 30259490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1047 110 443 Glycoside Hydrolase AT3G07070 53.846 3.56e-117 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Dod04g1047 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1047 - - gmx:100807510 859.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1047 04 30256257 30259490 Dod04g1047 04 30256257 30259490 ECH