Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1031 ATGGGTGCAAGGGACTACTACAAGGTCCTCAAGGTGAACCGCAATGCCACAGATGAAGAATTAAAGAAGGCATACAAGAGGCTTGCAATGAAATGGCACCCAGACAAGAACCAACAGCAACACCAAGTCAAGAAGGAAGAAGCTGAGGCCAAGTTCAAGCAGATATCTGAGGCCTATGATGTCCTCAGTGACCCCAAGAAGCGCCAGATCTATGACTTCTATGGCCACTATCCCCTCAACTCCCTGAAGGTGAACAAGGCAAAAAGTGATCATGATGGTGGTGAGAAATTAGTAGCAGGGGTGGTTGAGAGCAAGCTTGTGTGTACCCTTGAGGAGCTTTACAAAGGTTGCAGAAGGAAGTTGAAGATCTCAAGGACTGTTGTTGATGAATTTAGTAAGTTGAAGTCTGTGGAAGAAACCTTGAAGATAGATATCAAACCTGGCTGGAAGAAGGGCACAAAAATAACTTTTCCTGGGAAAGGAAACCAAGCAGAAGCAGGAGCCACTCCTGCTGATCTAATCTTTGTGGTGGATGAGAAACCGCATGCTGTTTTCAAGAGGGATGGTAATGATTTGGTTGTCACCCAGAAAATCTTGCTTGTTGAGGCTCTCTTAGGAAAGACTCTCAACTTGACAACATTGGATGGAAGAGACCTCACAGTCCAAGTGACAGATGTTGTGAAACCAGGCTATGTGTTGGTGGTCCCAAATGAAGGAATGCCCATTTCAAAGGAACCCGGCAAGAAAGGATCCTTAAGAATCAAGTTTGATGTTATGTTCCCTTCAAGGCTCACCACACAACAGAAGCATGAGCTGAAAAGGATTATGAGAAATCATGATAAGAGCTAA 849 0.4464 MGARDYYKVLKVNRNATDEELKKAYKRLAMKWHPDKNQQQHQVKKEEAEAKFKQISEAYDVLSDPKKRQIYDFYGHYPLNSLKVNKAKSDHDGGEKLVAGVVESKLVCTLEELYKGCRRKLKISRTVVDEFSKLKSVEETLKIDIKPGWKKGTKITFPGKGNQAEAGATPADLIFVVDEKPHAVFKRDGNDLVVTQKILLVEALLGKTLNLTTLDGRDLTVQVTDVVKPGYVLVVPNEGMPISKEPGKKGSLRIKFDVMFPSRLTTQQKHELKRIMRNHDKS* 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1031 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 184 271 IPR008971 GO:0006457|GO:0051082
Dod04g1031 282 SUPERFAMILY Chaperone J-domain 2 79 IPR036869 -
Dod04g1031 282 SMART dnaj_3 4 67 IPR001623 -
Dod04g1031 282 PANTHER DNAJ HEAT SHOCK FAMILY PROTEIN 1 278 - -
Dod04g1031 282 SUPERFAMILY HSP40/DnaJ peptide-binding domain 104 182 IPR008971 GO:0006457|GO:0051082
Dod04g1031 282 PRINTS DnaJ domain signature 47 67 IPR001623 -
Dod04g1031 282 PRINTS DnaJ domain signature 67 86 IPR001623 -
Dod04g1031 282 PRINTS DnaJ domain signature 25 40 IPR001623 -
Dod04g1031 282 PRINTS DnaJ domain signature 7 25 IPR001623 -
Dod04g1031 282 ProSiteProfiles dnaJ domain profile. 5 75 IPR001623 -
Dod04g1031 282 Pfam DnaJ C terminal domain 102 261 IPR002939 -
Dod04g1031 282 CDD DnaJ 5 64 IPR001623 -
Dod04g1031 282 ProSitePatterns Nt-dnaJ domain signature. 52 71 IPR018253 -
Dod04g1031 282 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 278 - -
Dod04g1031 282 Gene3D DnaJ domain 1 93 IPR036869 -
Dod04g1031 282 CDD DnaJ_C 102 264 - -
Dod04g1031 282 Gene3D - 181 282 - -
Dod04g1031 282 Coils Coil 38 58 - -
Dod04g1031 282 Pfam DnaJ domain 5 72 IPR001623 -
Dod04g1031 282 Gene3D - 100 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1031 Dod-Chr4 29938704 29940874 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1031 4 74 C2H2 Transcription Factor Family AT1G74250 39.437 1.31e-11 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1031 K09510 - gmx:100786068 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1031 04 29938704 29940874 Dod04g1031 04 29938704 29940874 ECH
Dod04g1031 04 29938704 29940874 Dod02g1569 02 19162344 19165838 PCT