Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1030 ATGCATGATATTATTTTTTCGTTTTTCTTGAGCATTAGATGTTTAACTGTTAACCTCTGGTTTCCTGCGAACATGCAGACTGTTCGCTTTAAAAATGAATTGGAGCGTAACATTACAATCAAGCTTGGCTATGCAAATGCTAAGATATACAAGTGTGAAGATGATCGATGTCCCAGGCCTATGTGCTACAAGGCATATGGAAGTGGGAAGGAAGACAGTCCCATGTGTGATGTGCCAGCGTTTGAAAACTGCAGGATGAAACTGCTGAGACATGTTTCTTTTGTGGATTGCCCAGGCCATGATATTCTCATGGCTACAATGCTTAATGGAGCAGCAATCATGGATGGAGCTTTGCTACTTATAGCTGCTAATGAGAGCTGTCCACAGCCACAAACCTCAGAGCATTTAGCCGCTGTGGAGATTATGCGTCTACAGCACATAATTATCCTACAGAATAAAGTTGACTTGATTCAAGAAAATGTGGCAATCAATCAACATGAAGCAATACAGAAGTTTATCCAGGGAACTGTTGCCGATGGTGCACCAGTAGTACCAATATCAGCACAATTGAAGTATAACATTGATGTTGTGTGTGAGTATATTGTAAAAAAGATCCCAATTCCTGAAAGGAACTTCATTTCTCCACCCAATATGATTGTAATTCGGTCATTTGATGTTAATAAACCTGGTTTTGAGGTTGATGAAATAAAAGGAGGCGTAGCTGGTGGAAGCATTTTGCGGGGTGTTTTGAAGGTAAACCAATTCATTGAGGTTCGACCTGGAATTGTTGTTAAAGACGAGAGTGGGAATATTAGATGCACACCTATATACTCTAGAATAGTATCACTGTATGCTGAGCAAAATGAGCTTCAATTTGCTGTGCCCGGAGGCCTCATTGGTGTTGGGACAACAATGGATCCAACTTTGACACGTGCTGATAGGTTGGTTGGGCAAGTTCTTGGAGAGGTTGGATCTCTGCCTGAGGTTTTTGTTGAACTTGAGGTGAACTTTTTCTTGCTTCGAAGGCTTTTGGGTGTCCGGACAAAAGGCTCCGAGAGACAGGGGAAGGTATCTAAGCTGGCTAAAGGAGAGATGCTAATGTTGAATATTGGATCAATGTCAACTGGTGCGAGGGTTATCGCTGTGAAGAATGATTTGGCAAAGTTGCAACTTACTTCCCCTGTGTGCACAAGCAAAGGTGAGAAGATTGCTCTTAGTCGACGTGTTGAGAAGCACTGGCGTCTTATTGGGTGGGGTCAGATCCAAGCAGGAATCACTCTTGATGTCCCACCTGCCCCCCAGCTGAGTTAA 1311 0.4287 MHDIIFSFFLSIRCLTVNLWFPANMQTVRFKNELERNITIKLGYANAKIYKCEDDRCPRPMCYKAYGSGKEDSPMCDVPAFENCRMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHLAAVEIMRLQHIIILQNKVDLIQENVAINQHEAIQKFIQGTVADGAPVVPISAQLKYNIDVVCEYIVKKIPIPERNFISPPNMIVIRSFDVNKPGFEVDEIKGGVAGGSILRGVLKVNQFIEVRPGIVVKDESGNIRCTPIYSRIVSLYAEQNELQFAVPGGLIGVGTTMDPTLTRADRLVGQVLGEVGSLPEVFVELEVNFFLLRRLLGVRTKGSERQGKVSKLAKGEMLMLNIGSMSTGARVIAVKNDLAKLQLTSPVCTSKGEKIALSRRVEKHWRLIGWGQIQAGITLDVPPAPQLS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1030 436 Gene3D Translation factors 213 326 - -
Dod04g1030 436 CDD eIF2_gamma 26 210 IPR044128 GO:0005525
Dod04g1030 436 Gene3D Translation factors 327 425 - -
Dod04g1030 436 CDD eIF2_gamma_III 327 421 IPR015256 -
Dod04g1030 436 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 FAMILY MEMBER 24 434 - -
Dod04g1030 436 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 27 212 IPR027417 -
Dod04g1030 436 Pfam Elongation factor Tu domain 2 238 320 IPR004161 GO:0005525
Dod04g1030 436 CDD eIF2_gamma_II 211 324 IPR044127 GO:0000049
Dod04g1030 436 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 325 422 IPR009001 -
Dod04g1030 436 Pfam Initiation factor eIF2 gamma, C terminal 332 421 IPR015256 -
Dod04g1030 436 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 3 24 434 - -
Dod04g1030 436 SUPERFAMILY Translation proteins 210 324 IPR009000 -
Dod04g1030 436 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 209 IPR000795 GO:0003924|GO:0005525
Dod04g1030 436 Pfam Elongation factor Tu GTP binding domain 29 206 IPR000795 GO:0003924|GO:0005525
Dod04g1030 436 Gene3D - 23 210 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1030 Dod-Chr4 29905278 29908228 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1030 23 433 Eukaryotic Initiation Factors Gene Family AT1G04170 89.294 0.0 781
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1030 K03242 - gmx:100784099 805.053