Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1020 ATGGCAAAGAGTGATGAAGTAAGGCTATTGGGTGCTTGGCCAAGTCCATTTGTGTTGAGGGCTAGGATAGCTCTTAATATCAAGTCAGTGAAGTATGAGTTCGTTGAGGAGACATTTCAGCCCAAAAGCCAGCTTCTTCTCCAATCCAACCCTGTCTACAAGAAAATCCCTGTACTCATTCATGGAGACAAACCTATTTGCGAGTCATTGATCATTGTGCAGTATGTGGATGATGCCTGGTCCTCTGGCCTTCCCATTCTCCCTTCTGATCCTTATGACCGTGCCATTGCTCGTTTCTGGGCTACCTATATTGATGACAAGTGGTACCCAGCCATGAAATCCCTTAGAGGAGCACAAGGAGAGGATGAGAGGAAAAGGTTGATAAAGGAGATAGAACAAGGATTGGCATTGCTAGAGGATGCGTTTAACAAGAGCACCAAAGGCAAGGCATTTTTTGGTGGTGACCAAATTGGGTACCTAGATATTGCATTTGGCAGCTTCTTGGGGTGGCTGAGGGTGACAGAGATATCCAATGGCTTGAAGTTGCTAGACCAATGCAGCACCCCTGGGTTGTTGAAATGGGCTGAAAGGTTCTGTGCACATGATGCAGTCAAAGATGTTATGCCTCAGACTCGGAAGCTTATTGAGTTTGCCAAGATACTTAAGGCCAGAATGGCTGCTGTTTTAACAAATTAG 696 0.4555 MAKSDEVRLLGAWPSPFVLRARIALNIKSVKYEFVEETFQPKSQLLLQSNPVYKKIPVLIHGDKPICESLIIVQYVDDAWSSGLPILPSDPYDRAIARFWATYIDDKWYPAMKSLRGAQGEDERKRLIKEIEQGLALLEDAFNKSTKGKAFFGGDQIGYLDIAFGSFLGWLRVTEISNGLKLLDQCSTPGLLKWAERFCAHDAVKDVMPQTRKLIEFAKILKARMAAVLTN* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1020 231 Pfam Glutathione S-transferase, C-terminal domain 99 202 IPR004046 -
Dod04g1020 231 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 221 IPR010987 -
Dod04g1020 231 PANTHER GLUTATHIONE S-TRANSFERASE U17 6 220 - -
Dod04g1020 231 Gene3D Glutaredoxin 1 86 - -
Dod04g1020 231 SUPERFAMILY Thioredoxin-like 7 110 IPR036249 -
Dod04g1020 231 Pfam Glutathione S-transferase, N-terminal domain 7 77 IPR004045 -
Dod04g1020 231 SUPERFAMILY GST C-terminal domain-like 86 220 IPR036282 -
Dod04g1020 231 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Dod04g1020 231 Gene3D - 87 229 - -
Dod04g1020 231 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 220 IPR045073 -
Dod04g1020 231 CDD GST_C_Tau 91 221 IPR045074 GO:0004364|GO:0006749
Dod04g1020 231 CDD GST_N_Tau 7 80 - -
Dod04g1020 231 SFLD Main.3: Omega- and Tau-like 3 227 IPR045073 -
Dod04g1020 231 SFLD Glutathione Transferase (cytosolic) 3 227 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1020 Dod-Chr4 29583532 29585173 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1020 1 219 Glutathione S-transferase Gene Family AT1G10370 64.091 1.28e-100 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1020 K00799 - aip:107635803 375.941