Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1016 ATGAAGGGATGGGACGGGTTTCAGTCTCGAGCAGGTGCAGGTGCAGGAGGTTCCTCTTTGTCTTCGCGATCCAGCTCCAGGATGAGCCAACGAACCACCTCTCAGACGGTTCGACTCGGCCGAGTCCAGCCCCAGGCTCCATCTCACCGCACCATCTTCTGCAACGATCGCGAAGCCAATCTCCCCATCCGATTCAAGGCAAATTCAATAACAACTACAAAATACAACGTTCTCACCTTTTTGCCAAAAGGATTGTTTGAACAGTTCAGACGGGTGGCTAATCTCTACTTTCTTACAATCTCAATTTTGTCAACCACGCCAATTAGTCCTGTGTCTCCAATTACTAATGTGCTTCCTCTATCTCTGGTGCTTCTCCTCTCTCTTATTAAGGAAGCTTTTGAGGACTGGAAGCGCTTTCAAAATGACATGGCCATAAACAATAATATGATAGATGTATTGCAAGATCAGAATTGGATGTCTATACCCTGGAAAAAGTTGCAGGTTGGAGACATCGTTAAGGTTAAGCAGGATGGATTCTTTCCTGCAGATCTGCTTTTCATCGCTAGTACAAATACAGATGGTGTTTGCTACATTGAGACTGCTAATTTGGATGGGGAAACCAATTTAAAGATTAGGAAAGCTTTGGAAAAGACTTGGGATTACGTGACTCCAGAGAAGGCATCTGAATTTAAAGGTGAAATTCAATGCGAACAACCAAACAATTCGCTGTATACCTTTACTGGAAATCTTATATTTCACAAGCAAACACTGCCTCTTAGTCCAAATCAAATTTTGTTGCGAGGATGCAGTCTCAGGAATACAGAGTATATTGTTGGGGTTGTTATTTTTACAGGACATGAAACAAAGGTGATGATGAATTCAATGAATGTTCCTTCCAAAAGAAGTACATTGGAGAGGAAGCTTGACAAGCTCATACTCACACTATTTGCAATTCTCTTCGTGATGTGTGTTATTGGAGCCTTTGGCAGTGCTATCTTCGTAAACAACAAATATTATTACCTACACCTTGATTCATCTGAGGAGGGCTCAGCGCAGTTCAACCCCAAAAACAGATTTTTGGTTTTTCTTCTGACTATGTTTACCCTTCTCACATTATACTCAACAATCATCCCCATTTCTCTTTATGTGTCTATAGAGATGATAAAATTTATCCAGTCAACTCAATATATCAACAAGGACTTGCACATGTACCATAGTGAAACCAATACACCTGCATTGGCCAGAACCTCAAATCTGAATGAAGAACTTGGGCAGGTGGAATACATTTTCTCTGACAAAACTGGGACTCTAACAAGAAACTTAATGGAGTTCTTCAAGTGTTCAATTGGAGGAGAGGCCTATGGACATGGTGTGACTGAAATTGAAAGGGGAATAGCAGAGCACAATGGCATGAAAATTGAGGAAAACAGATCAGCCAATGCAGTGAAAGAGAGAGGTTTTAATTTTGATGATGCTAGGCTAATGAGAGGAGCATGGAGGAATGAGTCTAATCCTGATGTGTGCAAGGAGTTCTTCAGATGTCTTGCTATATGCCATACTGTACTTCCTGAGGGTGATGAGTCCCCTGAAAAGATTAAATATCAAGCTGCATCTCCTGATGAGGCTGCTTTGGTTATTGCTGCAAAGCACTTTGGTTTCTTCTTTTACAGACGCACACCTACAATGATATATGTTCGTGAATCTCATGTTGAGAAGATGGGCAAAATTCAAGATGTGCCTTATGAAATTTTAAATGTGCTTGAGTTCAACAGTACAAGGAAGCGTCAGTCCGTTGTATGTCGATATCCAAATGGGAGGCTTGTGTTATACTGTAAGGGTGCTGATACTGTAATCTTTGAGAGACTGGCTAATGGTAATAATGAAATCAAGAAAGTGAGCAGGGAGCATTTGGAACAATTTGGATCTTCTGGATTACGCACATTATGCCTGGCTTACAAAGAATTGCATCCTGAGGCTTATGAAAGCTGGAATGAGAAGTTTATCCAGGCCAAGTCTTCTCTACGTGATCGTGAAAAGAAGTTAGATGAGGTTGCAGAACTTATTGAAAATGATCTCATTTTAATTGGTAGCACTGCCATAGAAGACAAGCTTCAGGAGGGAGTACCAGCTTGCATAGAAACGCTTAAAAGAGCTGGTATTAAAATTTGGGTTCTTACAGGGGACAAGATTGAAACAGCAATAAACATAGCTTATGCATGCAATTTAATAAACAATGAGATGAAGCAATTTATTATCAGTTCAGAGACTGATGCAATTAGAGAAGTTGAAGACAGGGGTGACCAAGTGGAAATTGCACGATTTATTAAAGAAGAAGTGAAGAAAGAGCTGAAGAAATGCATAGAGGAAGCGCAGAGCTACTTTCACTCCCTATCTGGACCAAAATTAGCACTTGTAATTGATGGAAAGTGTCTGATGTATGCACTGGATCCAAGTTTAAGAGTGATGCTGCTGAATTTAAGTTTGAATTGTCATGCTGTTGTTTGCTGCCGCGTTTCTCCTTTACAAAAAGCACAGGTTACAAGTATGGTCAAGAAAGGTGCACAGAAAATAACACTCGGTATTGGTGATGGAGCCAATGATGTTAGCATGATTCAAGCTGCTCACGTTGGTGTTGGCATAAGTGGGATGGAGGGGATGCAAGCTGTGATGGCAAGTGATTTTGCGATTGCACAGTTCCGTTACCTAGCAGATTTGCTTCTTGTTCATGGCCGGTGGTCGTATCTACGAATTTGCAAGGTGGTGATATACTTCTTTTACAAGAATCTCACATTTACTCTTACTCAGTTTTGGTTTACTTTTCAAACTGGGTTTTCTGGTCAGAGATTCTATGATGATTGGTTTCAGTCATTATATAATGTCATCTTCACGGCACTGCCTGTCATCATTGTTGGGTTATTTGACAAGGATGTCAGTGCATCTCTATCCAAGAAGTATCCTCAACTATATATGGAGGGAATAAAGAACGTCTTCTTCAAATGGAGAGTTGTGGCTATATGGGCCTTTTTTTCTGTATACCAGTCTCTAATATTCTACTATTTTGTGAACACAACAAATTTAAGTGCTAAAAGCTCAGCTGGAAAGATGTTTGGACTCTGGGATGTCAGTACAATGGCCTTCACATGTGTTGTAATAACTGTCAACTTGCGTCTACTTCTGATGAGTAATTCGATCACAAGATGGCACCATATTAGTGTCGGTGGAAGTATATTACTTTGGTTTATTTTTATTTTATTATACTCAGGGATTAGTACTACTTTTGATCGACAGGAGAATGTTTATTTTGTCATATATGTCTTGATGAGTACATTCTATTTCTACCTGACTGTACTACTTGTTCCCGTTGCTGCACTTTTCTGTGACTTTGTTTACCATGGGGTACAAAGATGGTTCTTCCCATATGATTATCAGATCATTCAGGAAATGCATACGCATGAGCTTGATGACACTGGCAGGGCACAACTGCTGGAGATAGGGAACCAGCTTACGCCCGATGAAGCAAGGAGCCATGCTATATCTCAACTCCCACGCGAGTTATCAAAGCACACTGGATTCGCTTTTGATTCACCTGGGTATGAGTCCTTTTTCGCTGCAGAGCTTGGTGTATATGCCCCACCAAAGGCATGGGACGTTGCAAGACGAGCTAGCATGAAATCAAGACTAAAGCTTGCGCAGCAAAACTAA 3702 0.4082 MKGWDGFQSRAGAGAGGSSLSSRSSSRMSQRTTSQTVRLGRVQPQAPSHRTIFCNDREANLPIRFKANSITTTKYNVLTFLPKGLFEQFRRVANLYFLTISILSTTPISPVSPITNVLPLSLVLLLSLIKEAFEDWKRFQNDMAINNNMIDVLQDQNWMSIPWKKLQVGDIVKVKQDGFFPADLLFIASTNTDGVCYIETANLDGETNLKIRKALEKTWDYVTPEKASEFKGEIQCEQPNNSLYTFTGNLIFHKQTLPLSPNQILLRGCSLRNTEYIVGVVIFTGHETKVMMNSMNVPSKRSTLERKLDKLILTLFAILFVMCVIGAFGSAIFVNNKYYYLHLDSSEEGSAQFNPKNRFLVFLLTMFTLLTLYSTIIPISLYVSIEMIKFIQSTQYINKDLHMYHSETNTPALARTSNLNEELGQVEYIFSDKTGTLTRNLMEFFKCSIGGEAYGHGVTEIERGIAEHNGMKIEENRSANAVKERGFNFDDARLMRGAWRNESNPDVCKEFFRCLAICHTVLPEGDESPEKIKYQAASPDEAALVIAAKHFGFFFYRRTPTMIYVRESHVEKMGKIQDVPYEILNVLEFNSTRKRQSVVCRYPNGRLVLYCKGADTVIFERLANGNNEIKKVSREHLEQFGSSGLRTLCLAYKELHPEAYESWNEKFIQAKSSLRDREKKLDEVAELIENDLILIGSTAIEDKLQEGVPACIETLKRAGIKIWVLTGDKIETAINIAYACNLINNEMKQFIISSETDAIREVEDRGDQVEIARFIKEEVKKELKKCIEEAQSYFHSLSGPKLALVIDGKCLMYALDPSLRVMLLNLSLNCHAVVCCRVSPLQKAQVTSMVKKGAQKITLGIGDGANDVSMIQAAHVGVGISGMEGMQAVMASDFAIAQFRYLADLLLVHGRWSYLRICKVVIYFFYKNLTFTLTQFWFTFQTGFSGQRFYDDWFQSLYNVIFTALPVIIVGLFDKDVSASLSKKYPQLYMEGIKNVFFKWRVVAIWAFFSVYQSLIFYYFVNTTNLSAKSSAGKMFGLWDVSTMAFTCVVITVNLRLLLMSNSITRWHHISVGGSILLWFIFILLYSGISTTFDRQENVYFVIYVLMSTFYFYLTVLLVPVAALFCDFVYHGVQRWFFPYDYQIIQEMHTHELDDTGRAQLLEIGNQLTPDEARSHAISQLPRELSKHTGFAFDSPGYESFFAAELGVYAPPKAWDVARRASMKSRLKLAQQN* 1234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1016 1233 SFLD p-type atpase 412 912 IPR044492 -
Dod04g1016 1233 PRINTS P-type cation-transporting ATPase superfamily signature 430 444 - -
Dod04g1016 1233 PRINTS P-type cation-transporting ATPase superfamily signature 861 880 - -
Dod04g1016 1233 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 21 1229 - -
Dod04g1016 1233 CDD P-type_ATPase_APLT_Dnf-like 68 1021 - -
Dod04g1016 1233 SUPERFAMILY HAD-like 418 903 IPR036412 -
Dod04g1016 1233 ProSitePatterns E1-E2 ATPases phosphorylation site. 432 438 IPR018303 -
Dod04g1016 1233 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 437 699 IPR023299 GO:0000166
Dod04g1016 1233 SUPERFAMILY Calcium ATPase, transduction domain A 147 291 IPR008250 -
Dod04g1016 1233 Gene3D - 130 294 - -
Dod04g1016 1233 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 21 1229 - -
Dod04g1016 1233 Gene3D - 691 901 IPR023214 -
Dod04g1016 1233 MobiDBLite consensus disorder prediction 1 45 - -
Dod04g1016 1233 Pfam Cation transport ATPase (P-type) 527 621 - -
Dod04g1016 1233 Pfam Phospholipid-translocating ATPase N-terminal 52 116 IPR032631 -
Dod04g1016 1233 MobiDBLite consensus disorder prediction 14 42 - -
Dod04g1016 1233 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 65 1147 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Dod04g1016 1233 Pfam E1-E2 ATPase 147 382 - -
Dod04g1016 1233 Gene3D - 561 681 IPR023299 GO:0000166
Dod04g1016 1233 Pfam Phospholipid-translocating P-type ATPase C-terminal 889 1139 IPR032630 -
Dod04g1016 1233 SUPERFAMILY Calcium ATPase, transmembrane domain M 64 1139 IPR023298 -
Dod04g1016 1233 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 834 940 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Dod04g1016 1233 SFLD C1.7: P-type atpase like 412 912 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1016 Dod-Chr4 29482580 29518104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1016 22 1232 Primary Pumps ATPases AT1G59820 79.043 0.0 2062
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1016 K14802 - gmx:100815547 2214.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1016 04 29482580 29518104 Dod04g1016 04 29482580 29518104 ECH