Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod04g1001 ATGGCTTTGAATATGATGCTTCAACCACAACCAAGGCTTCTTCTTCTTCTCCTGAGCCTTGTTTTGGTTTTGCTTTCTTTGTTAGTTCCATCCTGCCATTCCCAGACCGGCACTTCTCCTCAGAACATTGAAACTTTCTATCCAAATGAAACTTCAACACCAGCACCAGCACCAGCACCAGTACCAGTACCGCCGAAACAAAGGCCTGAACCACCAACAAAGCCTCAACCATCACCACCACCAACACATGAGCCGGCCAAAGGACCTGTCGCAGCATCAAGCGGCACTTCATCAAATGGTAAGGTAGCAATGGCGGTGGCTGCAACTGCAGCAAGCACCATAGTTATTTGTGGTTTGCTTTTCATTATACTTCAAAGATGCTTCAGGGCAAGGAGGAGGAAGGAGATAACCAACAATGCTTATGCTGGAGATAGCCGTGTCGTGCCTCAAGGGAATGCGTTTGAGCGAATCGATGGGAATGTCAAGGGACTGATTGTTGATGAGGATGGTTTGGATGTGGTTTATTGGAGAAAGCTTGAAGGGAGGAACTCCAAGAGGGGTCTTCATAAGGAGGTCTTGCAAAGTCCTAAAGACAAAGACAAAGAAAAAGAAGAGGATGGTCATGAAGGAAATCAGGTGAAAAAATCCAGGTCCATCCAAGAAGTTCCTCTACTTAGAGGGAAATCTTCAACTTCCCACATAAATATAGTTCCAGAAGTGGATGAGCCATATAGAATGGAAAGAATTCCCCTTCATACTTCTGCTCCCAATCCTATTCCTACAAGTTTCCCTGCATCAGTTGGTGCTGCTTTCAACAATGTTCAGAAACCAGACTCCCCAACTGAATCGTCAACTCCAGCCCCTCCTGCTTCACCATCAACACCATCCTCAGAAACTTTGTCAGCAATTCCAAAAGGGAATAACAGCCCTGCAGTACCAGCACCTCCCCCTCTACCAATCCCGGCTAGAAAGAGGCCAGCACCACCTCCTCCTCCTCCACCAAAGGCAGGTACTTTGAGGTCATCATCAAAGCCACCACCTGCCCCTCTTGAAATGCTAATTACCTCCACCAGTAAGCGAACTAACTCCTCGGGGAAAGGCACACCAGAGTCCAATGATGATCAAGTGAAGCTGAAGCCTTTGCATTGGGATAAGGTGAATACTAATGTTGATCACTCCATGGTGTGGGACAAAGTCGATCGCGGCTCTTTCAGAGCTGATCAAGATCTCATGGAAGCTCTCTTCGGTTATGTCGCCACCAACCGAAGATCCCCCAAAGGAAAGAATCCAAGCAAGGATACCTCGGCCTCCTCAGCAAAAATTTTCCTTCTAGACCCCAAAAAATCACAGAACATTGCTATTGTTTTGAAATCTCTTGCAGTCTCACAAGATGAAATTCTTGATGCACTCATTGATGGTAAAGGCCTTAATGCAGATACTCTTGAAAAGCTTGTTAGAATTGCTCCAACAGAAGAGGAGCAAGCTCTTATCCTTGAGTACACAGGGGACCCTGCAAGACTTGCAGCAGCTGAATCTTACCTCTATCACATCCTTAAAGCTGTTCCTTCAGCATTTAAGCGCTTGAGTGCCATGTTATTCAGGTTGAACTATGACTCTGAGATTCTAGAAATCAAGGAGTCTCTTCAGGTCCTTGAACTGGGGTGCAAGGAGCTTAAAAACCAGAGAATATTTGTGAAGCTTCTTGAAGCAGTGCTTAAGGCAGGAAACCGTATGAATGCAGGAACAGCCAGAGGTAATGCTCAAGCATTCAACTTGGCTTCTCTAAGGAAGCTCTCTGATGTCAAGAGCACCAATGGAAAAACAACATTACTTCACTTTGTGGTTGAAGAAGTAGTCCGTTCTGAAGGAAAGCGTGTCCTTCTCAACCGCAACGGCAGCCTGAGCCGGAGTAGCAGTAGGAGCAGCAACAACAGCAATGAAAACTTTGAGAACTATGCTGCTTCAAATGAACAAAGAGAAAGGGAATACACAACACTAGGATTGCCAGTTGTAGGAGGGATCAGTTCTGAGTTTTTCAACGTTAAGAAAGCAGCACTTATAGATTATAATACCTTAGTTGGTTCAATCTCAACCCTCTCAACCCAGATACTTGAAATTCAAGAAATTGTTTCCCAATGCAGAAAGGGTGAGGGAGGGTATTTTGTGAAAGAAATGGAACATTTTATTCGGAATGCCGGGGAAGAATTGAGATCAGTGAGGGAGGAGCAAACAAGGGTAATGCAGCTTATCAAGAGAACAACAGAATATTATCAAGGAGGAGCTACAAGAGGCACTGCAGAAAACAGTCTTCAACTGTTTGTCATAGTGAAGGATTTTATGGGAATGGTTGATCAAGTCTGCATTGAAATTGCACGCAACATGCAGAAGAGGAAGACACACAAGGCATCATCATAA 2415 0.4493 MALNMMLQPQPRLLLLLLSLVLVLLSLLVPSCHSQTGTSPQNIETFYPNETSTPAPAPAPVPVPPKQRPEPPTKPQPSPPPTHEPAKGPVAASSGTSSNGKVAMAVAATAASTIVICGLLFIILQRCFRARRRKEITNNAYAGDSRVVPQGNAFERIDGNVKGLIVDEDGLDVVYWRKLEGRNSKRGLHKEVLQSPKDKDKEKEEDGHEGNQVKKSRSIQEVPLLRGKSSTSHINIVPEVDEPYRMERIPLHTSAPNPIPTSFPASVGAAFNNVQKPDSPTESSTPAPPASPSTPSSETLSAIPKGNNSPAVPAPPPLPIPARKRPAPPPPPPPKAGTLRSSSKPPPAPLEMLITSTSKRTNSSGKGTPESNDDQVKLKPLHWDKVNTNVDHSMVWDKVDRGSFRADQDLMEALFGYVATNRRSPKGKNPSKDTSASSAKIFLLDPKKSQNIAIVLKSLAVSQDEILDALIDGKGLNADTLEKLVRIAPTEEEQALILEYTGDPARLAAAESYLYHILKAVPSAFKRLSAMLFRLNYDSEILEIKESLQVLELGCKELKNQRIFVKLLEAVLKAGNRMNAGTARGNAQAFNLASLRKLSDVKSTNGKTTLLHFVVEEVVRSEGKRVLLNRNGSLSRSSSRSSNNSNENFENYAASNEQREREYTTLGLPVVGGISSEFFNVKKAALIDYNTLVGSISTLSTQILEIQEIVSQCRKGEGGYFVKEMEHFIRNAGEELRSVREEQTRVMQLIKRTTEYYQGGATRGTAENSLQLFVIVKDFMGMVDQVCIEIARNMQKRKTHKASS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod04g1001 804 PANTHER FORMIN-RELATED 1 802 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Dod04g1001 804 SMART it6_source 368 798 IPR015425 -
Dod04g1001 804 MobiDBLite consensus disorder prediction 33 52 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 309 340 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 33 97 - -
Dod04g1001 804 Pfam Formin Homology 2 Domain 373 783 IPR015425 -
Dod04g1001 804 Coils Coil 541 561 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 255 281 - -
Dod04g1001 804 Gene3D Formin, FH2 domain 375 804 IPR042201 -
Dod04g1001 804 MobiDBLite consensus disorder prediction 251 380 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 187 215 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 354 371 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 187 227 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 633 656 - -
Dod04g1001 804 MobiDBLite consensus disorder prediction 53 86 - -
Dod04g1001 804 ProSiteProfiles Formin homology-2 (FH2) domain profile. 368 804 IPR015425 -
Dod04g1001 804 Coils Coil 722 742 - -
Dod04g1001 804 PANTHER FORMIN-LIKE PROTEIN 1 802 - -
Dod04g1001 804 SUPERFAMILY Formin homology 2 domain (FH2 domain) 329 800 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod04g1001 Dod-Chr4 29171408 29174452 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod04g1001 5 799 FH2 protein (formin) Gene Family AT1G70140 42.543 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod04g1001 - - vun:114178801 909.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod04g1001 04 29171408 29174452 Dod04g1001 04 29171408 29174452 ECH